MSDB
Showing repeats of Rattus norvegicus (Rat)

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Showing 1451 to 1475 repeats of 4777636

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
chr1 1538294 1538338 AC 44 - 22 GT ENSRNOT00000044523.3 1545134 1546169 + Intergenic -6796
chr1 1538568 1538580 AAATT 12 + 2 AATTA ENSRNOT00000044523.3 1545134 1546169 + Intergenic -6554
chr1 1539352 1539364 AAATGC 12 - 2 GCATTT ENSRNOT00000044523.3 1545134 1546169 + Intergenic -5770
chr1 1539489 1539502 AAATGG 13 - 2 TTTCCA ENSRNOT00000044523.3 1545134 1546169 + Intergenic -5632
chr1 1540549 1540564 AG 15 - 7 TC ENSRNOT00000044523.3 1545134 1546169 + Intergenic -4570
chr1 1542386 1542398 AAAATG 12 - 2 TTCATT ENSRNOT00000044523.3 1545134 1546169 + Intergenic -2736
chr1 1545899 1545914 AGG 15 - 5 CTC ENSRNOT00000044523.3 1545134 1546169 + Exon 765
chr1 1546514 1546527 AATAGT 13 - 2 TACTAT ENSRNOT00000044523.3 1545134 1546169 + Intergenic 1380
chr1 1552599 1552614 AGGGGG 15 - 2 CCCCTC ENSRNOT00000044523.3 1545134 1546169 + Intergenic 7465
chr1 1553615 1553628 ATATC 13 + 2 TATCA ENSRNOT00000044523.3 1545134 1546169 + Intergenic 8481
chr1 1555303 1555317 AGGGGG 14 + 2 GGGGAG ENSRNOT00000044523.3 1545134 1546169 + Intergenic 10169
chr1 1556204 1556220 AAAAC 16 + 3 ACAAA ENSRNOT00000044523.3 1545134 1546169 + Intergenic 11070
chr1 1556229 1556242 AAAAAG 13 + 2 AAAAAG ENSRNOT00000044523.3 1545134 1546169 + Intergenic 11095
chr1 1556495 1556509 AT 14 + 7 TA ENSRNOT00000044523.3 1545134 1546169 + Intergenic 11361
chr1 1557457 1557469 AAAC 12 + 3 CAAA ENSRNOT00000044523.3 1545134 1546169 + Intergenic 12323
chr1 1557644 1557656 AT 12 + 6 TA ENSRNOT00000044523.3 1545134 1546169 + Intergenic 12510
chr1 1560338 1560352 AGGGGG 14 + 2 GGGAGG ENSRNOT00000044523.3 1545134 1546169 + Intergenic 15204
chr1 1560675 1560689 AGGGGG 14 + 2 GGGAGG ENSRNOT00000044523.3 1545134 1546169 + Intergenic 15541
chr1 1563468 1563483 AAGATG 15 - 2 ATCTTC ENSRNOT00000044523.3 1545134 1546169 + Intergenic 18334
chr1 1563791 1563805 AAAAC 14 + 2 AAAAC ENSRNOT00000044523.3 1545134 1546169 + Intergenic 18657
chr1 1565698 1565710 AAAAAT 12 - 2 TTTATT ENSRNOT00000044523.3 1545134 1546169 + Intergenic 20564
chr1 1566246 1566258 AAAATG 12 - 2 TTCATT ENSRNOT00000044523.3 1545134 1546169 + Intergenic 21112
chr1 1567555 1567567 AAAAAG 12 - 2 TCTTTT ENSRNOT00000044523.3 1545134 1546169 + Intergenic 22421
chr1 1567891 1567906 AAATAG 15 - 2 TTTCTA ENSRNOT00000044523.3 1545134 1546169 + Intergenic 22757
chr1 1568072 1568084 AAATCT 12 + 2 AAATCT ENSRNOT00000044523.3 1545134 1546169 + Intergenic 22938