Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7301 to 7325 repeats of 1284974
Go To:
<<
<
291
292
293
294
295
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
5495965
5495978
AAAATG
13
+
2
AAATGA
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
135046
chr1
5497198
5497210
AAAT
12
+
3
ATAA
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
133814
chr1
5497655
5497674
AAAT
19
-
4
ATTT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
133350
chr1
5498820
5498845
A
25
+
25
A
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
132179
chr1
5498905
5498922
AAAAC
17
-
3
TTTTG
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
132102
chr1
5499384
5499404
A
20
+
20
A
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
131620
chr1
5499405
5499417
AAAATT
12
-
2
AATTTT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
131607
chr1
5499673
5499685
AAAAAT
12
-
2
TTTTAT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
131339
chr1
5499744
5499771
AAAC
27
+
6
AAAC
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
131253
chr1
5499764
5499776
AAAAC
12
+
2
AAACA
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
131248
chr1
5499773
5499786
AAAAAC
13
+
2
AAACAA
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
131238
chr1
5501347
5501361
AAGGGG
14
+
2
GGGAAG
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
129663
chr1
5501353
5501370
AAGGG
17
+
3
GGGAA
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
129654
chr1
5502135
5502147
AAGAC
12
-
2
TGTCT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128877
chr1
5502388
5502405
AC
17
+
8
AC
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128619
chr1
5502512
5502526
AAAAAG
14
-
2
TTTTTC
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128498
chr1
5502532
5502544
AAAAAG
12
-
2
CTTTTT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128480
chr1
5502543
5502566
AAAAAG
23
-
3
TTTTTC
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128458
chr1
5502566
5502583
AAAAGG
17
-
2
TTTTCC
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128441
chr1
5502586
5502598
AAAAGG
12
-
2
TTCCTT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128426
chr1
5502599
5502660
AAAAAG
61
-
10
TTTCTT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128364
chr1
5502697
5502712
AAG
15
-
5
TCT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128312
chr1
5502708
5502724
AAAGAG
16
-
2
TTCTCT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128300
chr1
5502806
5502820
AAAAAG
14
-
2
TTCTTT
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128204
chr1
5502828
5502845
AAAAGG
17
-
2
TTTTCC
ENSGALT00000107656.1
5629178
5631024
-
Intergenic
128179