Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2576 to 2600 repeats of 264324
Go To:
<<
<
102
103
104
105
106
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1532008
1532023
AAAAAC
15
+
2
AAACAA
FBtr0077874
1522697
1524257
+
Intergenic
9311
chr2L
1532123
1532140
AC
17
+
8
CA
FBtr0077874
1522697
1524257
+
Intergenic
9426
chr2L
1532607
1532622
AATCC
15
+
3
AATCC
FBtr0077874
1522697
1524257
+
Intergenic
9910
chr2L
1532753
1532768
ACATCT
15
+
2
ATCTAC
FBtr0077874
1522697
1524257
+
Intergenic
10056
chr2L
1532809
1532821
AATGGC
12
+
2
GCAATG
FBtr0077874
1522697
1524257
+
Intergenic
10112
chr2L
1533348
1533361
A
13
+
13
A
FBtr0077874
1522697
1524257
+
Intergenic
10651
chr2L
1533438
1533453
AAACAC
15
-
2
TTTGTG
FBtr0077874
1522697
1524257
+
Intergenic
10741
chr2L
1533734
1533746
AAAT
12
-
3
ATTT
FBtr0077874
1522697
1524257
+
Intergenic
11037
chr2L
1533876
1533888
ACGCAT
12
-
2
TGCGTA
FBtr0077874
1522697
1524257
+
Intergenic
11179
chr2L
1534988
1535003
AACAAT
15
-
2
TTATTG
FBtr0077874
1522697
1524257
+
Intergenic
12291
chr2L
1536207
1536220
ACTCC
13
+
2
CCACT
FBtr0077874
1522697
1524257
+
Intergenic
13510
chr2L
1536251
1536264
AATTAC
13
-
2
TGTAAT
FBtr0077874
1522697
1524257
+
Intergenic
13554
chr2L
1536561
1536573
AATAT
12
-
2
TTATA
FBtr0077874
1522697
1524257
+
Intergenic
13864
chr2L
1536827
1536840
AGCG
13
-
3
CGCT
FBtr0077874
1522697
1524257
+
Intergenic
14130
chr2L
1538983
1539003
AACT
20
-
5
TTAG
FBtr0077874
1522697
1524257
+
Intergenic
16286
chr2L
1539022
1539040
AC
18
+
9
AC
FBtr0077874
1522697
1524257
+
Intergenic
16325
chr2L
1539098
1539113
AT
15
+
7
AT
FBtr0077874
1522697
1524257
+
Intergenic
16401
chr2L
1539446
1539461
AAATT
15
-
3
TTTAA
FBtr0077874
1522697
1524257
+
Intergenic
16749
chr2L
1540201
1540219
ACAGAT
18
+
3
CAGATA
FBtr0310017
1555129
1608404
+
Intergenic
-14910
chr2L
1540216
1540228
AT
12
+
6
AT
FBtr0310017
1555129
1608404
+
Intergenic
-14901
chr2L
1540723
1540735
AACTGG
12
+
2
GAACTG
FBtr0310017
1555129
1608404
+
Intergenic
-14394
chr2L
1542465
1542477
AAATT
12
-
2
TAATT
FBtr0310017
1555129
1608404
+
Intergenic
-12652
chr2L
1542734
1542746
A
12
+
12
A
FBtr0310017
1555129
1608404
+
Intergenic
-12383
chr2L
1543128
1543147
AAAT
19
-
4
TATT
FBtr0310017
1555129
1608404
+
Intergenic
-11982
chr2L
1543495
1543508
AGATGG
13
+
2
GAGATG
FBtr0310017
1555129
1608404
+
Intergenic
-11621