Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2651 to 2675 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1574594
1574607
ACTCAG
13
-
2
GAGTCT
FBtr0310017
1555129
1608404
+
Intron
19465
chr2L
1574618
1574631
AATCGG
13
-
2
GATTCC
FBtr0310017
1555129
1608404
+
Intron
19489
chr2L
1574759
1574771
A
12
+
12
A
FBtr0310017
1555129
1608404
+
Intron
19630
chr2L
1575281
1575296
AC
15
+
7
CA
FBtr0310017
1555129
1608404
+
Intron
20152
chr2L
1578112
1578126
AAGTG
14
+
2
AAGTG
FBtr0310017
1555129
1608404
+
Intron
22983
chr2L
1578303
1578315
AATGTC
12
+
2
TCAATG
FBtr0310017
1555129
1608404
+
Intron
23174
chr2L
1579701
1579713
A
12
-
12
T
FBtr0310017
1555129
1608404
+
Intron
24572
chr2L
1579836
1579848
AAAC
12
-
3
TTTG
FBtr0310017
1555129
1608404
+
Intron
24707
chr2L
1580134
1580146
AATCAT
12
-
2
ATGATT
FBtr0310017
1555129
1608404
+
Intron
25005
chr2L
1580251
1580263
AAAGTT
12
-
2
AACTTT
FBtr0310017
1555129
1608404
+
Intron
25122
chr2L
1580354
1580366
AAAAGT
12
-
2
ACTTTT
FBtr0310017
1555129
1608404
+
Intron
25225
chr2L
1581108
1581121
ACGCC
13
-
2
GGCGT
FBtr0310017
1555129
1608404
+
Intron
25979
chr2L
1581664
1581678
AAGAAT
14
+
2
AAGAAT
FBtr0310017
1555129
1608404
+
Intron
26535
chr2L
1581916
1581929
AAACAC
13
+
2
AAACAC
FBtr0310017
1555129
1608404
+
Intron
26787
chr2L
1582310
1582323
AAACAC
13
-
2
GTGTTT
FBtr0310017
1555129
1608404
+
Intron
27181
chr2L
1582490
1582502
ACATAT
12
+
2
ATATAC
FBtr0310017
1555129
1608404
+
Intron
27361
chr2L
1583037
1583049
AAGCTC
12
+
2
GCTCAA
FBtr0310017
1555129
1608404
+
Intron
27908
chr2L
1583220
1583232
AGATCG
12
+
2
TCGAGA
FBtr0310017
1555129
1608404
+
Intron
28091
chr2L
1583288
1583300
AAAACG
12
-
2
TCGTTT
FBtr0310017
1555129
1608404
+
Intron
28159
chr2L
1584208
1584221
AAATAT
13
-
2
TATTTA
FBtr0310017
1555129
1608404
+
Intron
29079
chr2L
1586681
1586693
AGAGGC
12
-
2
TGCCTC
FBtr0077917
1584866
1587155
-
Exon
462
chr2L
1588610
1588622
AATGAG
12
-
2
TCTCAT
FBtr0310017
1555129
1608404
+
Intron
33481
chr2L
1589043
1589058
AATGAG
15
-
2
CATTCT
FBtr0310019
1555129
1608404
+
Intron
33914
chr2L
1589087
1589104
AAACGG
17
+
2
GGAAAC
FBtr0344146
1555129
1608404
+
Intron
33958
chr2L
1589185
1589197
AAAATG
12
-
2
TCATTT
FBtr0310020
1555129
1608404
+
Intron
34056