Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3051 to 3075 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1748651
1748663
ACCTG
12
+
2
CTGAC
FBtr0077886
1737467
1750612
+
Intron
11184
chr2L
1748699
1748716
ATCGC
17
+
3
TCGCA
FBtr0077886
1737467
1750612
+
Intron
11232
chr2L
1748926
1748938
AACCCC
12
+
2
CCCAAC
FBtr0077886
1737467
1750612
+
Intron
11459
chr2L
1749147
1749167
AT
20
+
10
TA
FBtr0077886
1737467
1750612
+
Intron
11680
chr2L
1749286
1749298
AAATG
12
-
2
TTTCA
FBtr0077886
1737467
1750612
+
Intron
11819
chr2L
1750663
1750677
AAATAT
14
+
2
AATATA
FBtr0077903
1750687
1752122
-
Intergenic
1445
chr2L
1753565
1753577
AGCGGC
12
+
2
CAGCGG
FBtr0077887
1752308
1752848
+
Intergenic
1257
chr2L
1754354
1754375
ACTGGG
21
+
3
ACTGGG
FBtr0077902
1755253
1756451
-
Intergenic
2076
chr2L
1754413
1754425
AATGCT
12
-
2
ATTAGC
FBtr0077902
1755253
1756451
-
Intergenic
2026
chr2L
1754989
1755003
ACAGCC
14
-
2
TGGCTG
FBtr0077902
1755253
1756451
-
Intergenic
1448
chr2L
1756732
1756744
AACCAG
12
-
2
TTCTGG
FBtr0077902
1755253
1756451
-
Intergenic
-281
chr2L
1756996
1757015
AACC
19
-
4
GGTT
FBtr0077902
1755253
1756451
-
Intergenic
-545
chr2L
1757495
1757509
ACTGC
14
+
2
TGCAC
FBtr0077901
1758286
1759093
-
Intergenic
1584
chr2L
1758144
1758159
AATGGC
15
-
2
CATTGC
FBtr0077901
1758286
1759093
-
Intergenic
934
chr2L
1758811
1758823
ACACAT
12
+
2
ACATAC
FBtr0077901
1758286
1759093
-
Intron
270
chr2L
1759515
1759527
AAATGG
12
+
2
AAATGG
FBtr0077901
1758286
1759093
-
Intergenic
-422
chr2L
1759785
1759801
C
16
+
16
C
FBtr0077901
1758286
1759093
-
Intergenic
-692
chr2L
1759905
1759917
AAAAT
12
-
2
TTATT
FBtr0077901
1758286
1759093
-
Intergenic
-812
chr2L
1760120
1760134
AAACTT
14
-
2
TTTAAG
FBtr0077901
1758286
1759093
-
Intergenic
-1027
chr2L
1760399
1760411
AACACC
12
+
2
CAACAC
FBtr0077901
1758286
1759093
-
Intergenic
-1306
chr2L
1760457
1760469
ACCCCC
12
+
2
ACCCCC
FBtr0077901
1758286
1759093
-
Intergenic
-1364
chr2L
1760837
1760854
AAATC
17
+
3
AAATC
FBtr0077901
1758286
1759093
-
Intergenic
-1744
chr2L
1761103
1761116
AAAAT
13
-
2
TTTTA
FBtr0077901
1758286
1759093
-
Intergenic
-2010
chr2L
1761138
1761150
ACTATG
12
+
2
GACTAT
FBtr0077901
1758286
1759093
-
Intergenic
-2045
chr2L
1762784
1762796
AACAAT
12
-
2
ATTGTT
FBtr0077901
1758286
1759093
-
Intergenic
-3691