Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3126 to 3150 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1812686
1812698
ATC
12
-
4
GAT
FBtr0077896
1821256
1823331
-
Intergenic
10633
chr2L
1813502
1813514
AATGG
12
-
2
TTCCA
FBtr0077896
1821256
1823331
-
Intergenic
9817
chr2L
1814611
1814624
AAAGAG
13
+
2
AAAGAG
FBtr0077896
1821256
1823331
-
Intergenic
8707
chr2L
1815497
1815509
AAGGG
12
-
2
CCCTT
FBtr0077896
1821256
1823331
-
Intergenic
7822
chr2L
1815557
1815569
ACATCC
12
-
2
ATGTGG
FBtr0077896
1821256
1823331
-
Intergenic
7762
chr2L
1816045
1816060
AAAG
15
+
3
AAGA
FBtr0077896
1821256
1823331
-
Intergenic
7271
chr2L
1816567
1816585
AAAC
18
+
4
AACA
FBtr0077896
1821256
1823331
-
Intergenic
6746
chr2L
1816656
1816668
AACC
12
+
3
CCAA
FBtr0077896
1821256
1823331
-
Intergenic
6663
chr2L
1817452
1817464
AAACGG
12
+
2
GGAAAC
FBtr0077896
1821256
1823331
-
Intergenic
5867
chr2L
1818514
1818527
AATCCG
13
-
2
ATTCGG
FBtr0077896
1821256
1823331
-
Intergenic
4804
chr2L
1819304
1819320
AACTAC
16
-
2
TTGTAG
FBtr0077896
1821256
1823331
-
Intergenic
4011
chr2L
1819415
1819427
AAAT
12
-
3
TATT
FBtr0077896
1821256
1823331
-
Intergenic
3904
chr2L
1819537
1819550
AAATTC
13
+
2
TCAAAT
FBtr0077896
1821256
1823331
-
Intergenic
3781
chr2L
1820168
1820184
AATAT
16
-
3
TATAT
FBtr0077896
1821256
1823331
-
Intergenic
3147
chr2L
1820177
1820190
AAATAT
13
-
2
TTATAT
FBtr0077896
1821256
1823331
-
Intergenic
3141
chr2L
1820798
1820811
ACTCGC
13
-
2
TGCGAG
FBtr0077896
1821256
1823331
-
Intergenic
2520
chr2L
1821671
1821683
AATGGG
12
+
2
GGGAAT
FBtr0077896
1821256
1823331
-
Exon
1648
chr2L
1824500
1824512
AATCGG
12
-
2
ATTCCG
FBtr0334829
1824172
1826500
-
Exon
1988
chr2L
1826991
1827005
ACTGG
14
+
2
TGGAC
FBtr0334829
1824172
1826500
-
Intergenic
-491
chr2L
1828856
1828868
ACTGCC
12
+
2
CCACTG
FBtr0334829
1824172
1826500
-
Intergenic
-2356
chr2L
1830288
1830301
AATCG
13
-
2
ATTCG
FBtr0077894
1831627
1832565
-
Intergenic
2264
chr2L
1830708
1830720
AATCGC
12
+
2
CAATCG
FBtr0077894
1831627
1832565
-
Intergenic
1845
chr2L
1831201
1831213
AATTC
12
+
2
TTCAA
FBtr0077894
1831627
1832565
-
Intergenic
1352
chr2L
1831416
1831428
AACCG
12
+
2
CGAAC
FBtr0077894
1831627
1832565
-
Intergenic
1137
chr2L
1833331
1833343
AAAT
12
-
3
TATT
FBtr0077894
1831627
1832565
-
Intergenic
-766