Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3351 to 3375 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1962561
1962573
AAATGG
12
+
2
GAAATG
FBtr0330200
1950239
1970362
-
Intron
7789
chr2L
1964399
1964419
AAC
20
+
6
ACA
FBtr0330200
1950239
1970362
-
Intron
5943
chr2L
1964704
1964716
AAAGCG
12
+
2
CGAAAG
FBtr0330200
1950239
1970362
-
Intron
5646
chr2L
1964793
1964805
ACCAG
12
-
2
GTCTG
FBtr0330200
1950239
1970362
-
Intron
5557
chr2L
1965064
1965076
ACTC
12
-
3
GTGA
FBtr0330200
1950239
1970362
-
Intron
5286
chr2L
1966202
1966215
AATGGG
13
-
2
CCATTC
FBtr0330200
1950239
1970362
-
Intron
4147
chr2L
1967696
1967709
ACC
13
-
4
TGG
FBtr0330200
1950239
1970362
-
Intron
2653
chr2L
1968611
1968624
AAACC
13
+
2
AAACC
FBtr0077812
1965426
1965498
+
Intergenic
3185
chr2L
1968784
1968796
AGGGCG
12
+
2
GGCGAG
FBtr0077812
1965426
1965498
+
Intergenic
3358
chr2L
1969250
1969262
AAATG
12
-
2
CATTT
FBtr0077812
1965426
1965498
+
Intergenic
3824
chr2L
1969259
1969271
ACACTC
12
+
2
TCACAC
FBtr0077812
1965426
1965498
+
Intergenic
3833
chr2L
1969273
1969285
ACTCAG
12
-
2
GTCTGA
FBtr0077812
1965426
1965498
+
Intergenic
3847
chr2L
1970059
1970071
AAGCTC
12
-
2
CTTGAG
FBtr0334758
1973957
1975413
+
Intergenic
-3886
chr2L
1970100
1970114
AATTC
14
-
2
AATTG
FBtr0334758
1973957
1975413
+
Intergenic
-3843
chr2L
1970670
1970683
ACCCC
13
-
2
GTGGG
FBtr0334758
1973957
1975413
+
Intergenic
-3274
chr2L
1971420
1971432
AAAGGC
12
+
2
GGCAAA
FBtr0334758
1973957
1975413
+
Intergenic
-2525
chr2L
1971587
1971600
AGATGG
13
+
2
ATGGAG
FBtr0334758
1973957
1975413
+
Intergenic
-2357
chr2L
1971596
1971609
AG
13
+
6
GA
FBtr0334758
1973957
1975413
+
Intergenic
-2348
chr2L
1971818
1971832
AACTG
14
+
2
TGAAC
FBtr0334758
1973957
1975413
+
Intergenic
-2125
chr2L
1972909
1972921
ACAGCG
12
-
2
TCGCTG
FBtr0334758
1973957
1975413
+
Intergenic
-1036
chr2L
1974606
1974619
ACAGGT
13
-
2
TACCTG
FBtr0077813
1974112
1975413
+
Exon
494
chr2L
1975212
1975225
ACTAG
13
+
2
CTAGA
FBtr0077813
1974112
1975413
+
Exon
1100
chr2L
1975727
1975762
AC
35
-
17
GT
FBtr0077869
1975463
1980755
-
Exon
4993
chr2L
1975893
1975905
AACCCG
12
-
2
GTTCGG
FBtr0077869
1975463
1980755
-
Exon
4850
chr2L
1976243
1976255
AAACT
12
+
2
AACTA
FBtr0077869
1975463
1980755
-
Exon
4500