Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3851 to 3875 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
2284578
2284590
AACAAT
12
-
2
ATTGTT
FBtr0335161
2283705
2285003
-
Exon
413
chr2L
2288049
2288062
AATGCT
13
-
2
GCATTA
FBtr0302458
2287025
2287933
-
Intergenic
-116
chr2L
2288135
2288147
AATCGG
12
-
2
TTCCGA
FBtr0302458
2287025
2287933
-
Intergenic
-202
chr2L
2290403
2290415
AGCCGC
12
+
2
CCGCAG
FBtr0077800
2290224
2290698
-
Exon
283
chr2L
2290900
2290912
AAATG
12
-
2
TTCAT
FBtr0331451
2290224
2290738
-
Intergenic
-162
chr2L
2291119
2291136
AATCGG
17
-
2
GATTCC
FBtr0331451
2290224
2290738
-
Intergenic
-381
chr2L
2291135
2291147
AACAGG
12
-
2
CTGTTC
FBtr0331451
2290224
2290738
-
Intergenic
-397
chr2L
2291174
2291189
AGATGC
15
+
2
ATGCAG
FBtr0331451
2290224
2290738
-
Intergenic
-436
chr2L
2292328
2292340
AAATGC
12
-
2
TTGCAT
FBtr0331451
2290224
2290738
-
Intergenic
-1590
chr2L
2292578
2292592
AATGT
14
-
2
CATTA
FBtr0331451
2290224
2290738
-
Intergenic
-1840
chr2L
2292666
2292680
ACAGCC
14
-
2
TGTGGC
FBtr0331451
2290224
2290738
-
Intergenic
-1928
chr2L
2293343
2293359
ACAG
16
-
4
CTGT
FBtr0331451
2290224
2290738
-
Intergenic
-2605
chr2L
2293727
2293739
AAAAAG
12
+
2
GAAAAA
FBtr0331451
2290224
2290738
-
Intergenic
-2989
chr2L
2294128
2294144
AAAT
16
+
4
AATA
FBtr0331451
2290224
2290738
-
Intergenic
-3390
chr2L
2298041
2298053
AAAAAT
12
-
2
TTTATT
FBtr0077757
2300103
2300795
+
Intergenic
-2050
chr2L
2298259
2298274
AAAATT
15
-
2
TTTTAA
FBtr0077757
2300103
2300795
+
Intergenic
-1829
chr2L
2298999
2299015
AAAT
16
+
4
AATA
FBtr0077757
2300103
2300795
+
Intergenic
-1088
chr2L
2299352
2299364
ATATGC
12
+
2
TATGCA
FBtr0077757
2300103
2300795
+
Intergenic
-739
chr2L
2299599
2299612
AAAGGC
13
-
2
TTTGCC
FBtr0077757
2300103
2300795
+
Intergenic
-491
chr2L
2299830
2299843
AAT
13
-
4
TAT
FBtr0077757
2300103
2300795
+
Intergenic
-260
chr2L
2300882
2300894
AACTC
12
+
2
ACTCA
FBtr0303208
2300103
2300888
+
Exon
779
chr2L
2301118
2301130
AC
12
+
6
CA
FBtr0303208
2300103
2300888
+
Intergenic
1015
chr2L
2302287
2302300
AGGATG
13
+
2
GGATGA
FBtr0303208
2300103
2300888
+
Intergenic
2184
chr2L
2302644
2302658
AAACTT
14
+
2
TTAAAC
FBtr0303208
2300103
2300888
+
Intergenic
2541
chr2L
2305722
2305734
AAGT
12
-
3
TACT
FBtr0077758
2307948
2308872
+
Intergenic
-2214