Showing repeats of Caenorhabditis elegans (Roundworm)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2551 to 2575 repeats of 110476
Go To:
<<
<
101
102
103
104
105
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrI
1914149
1914161
AACT
12
-
3
TAGT
Y71G12A.2b
1895161
1923088
+
Intron
18988
chrI
1915916
1915942
AC
26
+
13
CA
Y71G12A.2b
1895161
1923088
+
Intron
20755
chrI
1917086
1917098
ACCATC
12
-
2
GGTGAT
Y71G12A.2c
1917049
1922991
+
Exon
37
chrI
1919345
1919358
AACATC
13
-
2
TGTTGA
Y71G12A.2c
1917049
1922991
+
Intron
2296
chrI
1919410
1919423
AATGAT
13
+
2
TGATAA
Y71G12A.2c
1917049
1922991
+
Intron
2361
chrI
1922240
1922254
AAATTG
14
+
2
TTGAAA
Y71G12A.2c
1917049
1922991
+
Intron
5191
chrI
1922265
1922278
A
13
+
13
A
Y71G12A.2c
1917049
1922991
+
Intron
5216
chrI
1922345
1922357
A
12
-
12
T
Y71G12A.2c
1917049
1922991
+
Intron
5296
chrI
1922909
1922921
AATCG
12
+
2
ATCGA
Y71G12A.2c
1917049
1922991
+
Exon
5860
chrI
1922953
1922966
A
13
-
13
T
Y71G12A.2c
1917049
1922991
+
Exon
5904
chrI
1925131
1925143
AAAAT
12
+
2
AAATA
Y51F10.5
1924300
1932260
+
Intron
831
chrI
1926284
1926301
A
17
-
17
T
Y51F10.5
1924300
1932260
+
Intron
1984
chrI
1926353
1926366
AT
13
+
6
AT
Y51F10.5
1924300
1932260
+
Intron
2053
chrI
1926491
1926503
AAAATG
12
+
2
GAAAAT
Y51F10.5
1924300
1932260
+
Intron
2191
chrI
1931194
1931206
AAAATT
12
-
2
TTTTAA
Y51F10.5
1924300
1932260
+
Intron
6894
chrI
1931230
1931242
AAATTC
12
+
2
AAATTC
Y51F10.5
1924300
1932260
+
Intron
6930
chrI
1931668
1931681
A
13
-
13
T
Y51F10.5
1924300
1932260
+
Intron
7368
chrI
1931781
1931793
AAAATT
12
-
2
AATTTT
Y51F10.5
1924300
1932260
+
Intron
7481
chrI
1933604
1933616
AAAATT
12
+
2
ATTAAA
Y51F10.4a
1932352
1945212
+
Intron
1252
chrI
1934245
1934257
AAATTC
12
-
2
GAATTT
Y51F10.4a
1932352
1945212
+
Intron
1893
chrI
1934829
1934841
ATCGCC
12
-
2
TGGCGA
Y51F10.4a
1932352
1945212
+
Exon
2477
chrI
1935429
1935441
AAAACG
12
-
2
TTTTCG
Y51F10.4a
1932352
1945212
+
Intron
3077
chrI
1935673
1935685
AAAACG
12
-
2
TTTTCG
Y51F10.4a
1932352
1945212
+
Intron
3321
chrI
1935847
1935859
AAAACG
12
-
2
TTTTCG
Y51F10.4a
1932352
1945212
+
Intron
3495
chrI
1936161
1936173
AAAACG
12
-
2
TTTTCG
Y51F10.4a
1932352
1945212
+
Intron
3809