Showing repeats of Caenorhabditis elegans (Roundworm)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2826 to 2850 repeats of 110476
Go To:
<<
<
112
113
114
115
116
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrI
2113816
2113828
AAGGAG
12
-
2
CTTCTC
Y37E3.16.2
2113614
2118530
-
Exon
4702
chrI
2114305
2114317
AAAATT
12
+
2
AAAATT
Y37E3.16.2
2113614
2118530
-
Intron
4213
chrI
2115114
2115126
A
12
+
12
A
Y37E3.16.2
2113614
2118530
-
Intron
3404
chrI
2117107
2117119
AAGCTT
12
+
2
AGCTTA
Y37E3.16.2
2113614
2118530
-
Intron
1411
chrI
2117783
2117796
AAAAAG
13
+
2
AAAAAG
Y37E3.16.2
2113614
2118530
-
Intron
734
chrI
2119066
2119078
AAAATG
12
+
2
GAAAAT
Y37E3.15c
2098647
2123427
+
Intron
20419
chrI
2119264
2119279
AATAT
15
-
3
ATATT
Y37E3.15c
2098647
2123427
+
Intron
20617
chrI
2119292
2119312
AAT
20
+
6
AAT
Y37E3.15c
2098647
2123427
+
Intron
20645
chrI
2119484
2119496
AACTC
12
-
2
GAGTT
Y37E3.15c
2098647
2123427
+
Intron
20837
chrI
2119534
2119547
AAACC
13
-
2
TTTGG
Y37E3.15c
2098647
2123427
+
Intron
20887
chrI
2120433
2120446
A
13
+
13
A
Y37E3.16.1
2113655
2118550
-
Intergenic
-1883
chrI
2123127
2123139
AAAAAC
12
+
2
CAAAAA
Y37E3.16.1
2113655
2118550
-
Intergenic
-4577
chrI
2123431
2123443
AG
12
-
6
TC
Y37E3.16.1
2113655
2118550
-
Intergenic
-4881
chrI
2123572
2123586
AAATTT
14
+
2
AAATTT
Y37E3.17a
2128590
2145971
+
Intergenic
-5004
chrI
2123734
2123746
A
12
+
12
A
Y37E3.17a
2128590
2145971
+
Intergenic
-4844
chrI
2123769
2123781
A
12
+
12
A
Y37E3.17a
2128590
2145971
+
Intergenic
-4809
chrI
2123842
2123856
AAAACT
14
+
2
AACTAA
Y37E3.17a
2128590
2145971
+
Intergenic
-4734
chrI
2124901
2124913
AAAAAT
12
+
2
AAAAAT
Y37E3.17a
2128590
2145971
+
Intergenic
-3677
chrI
2125234
2125251
AC
17
-
8
TG
Y37E3.17a
2128590
2145971
+
Intergenic
-3339
chrI
2125295
2125311
AG
16
-
8
TC
Y37E3.17a
2128590
2145971
+
Intergenic
-3279
chrI
2125467
2125480
AGATCT
13
+
2
TCTAGA
Y37E3.17a
2128590
2145971
+
Intergenic
-3110
chrI
2126834
2126851
AC
17
-
8
TG
Y37E3.17a
2128590
2145971
+
Intergenic
-1739
chrI
2126883
2126896
ACTC
13
+
3
CACT
Y37E3.17a
2128590
2145971
+
Intergenic
-1694
chrI
2126999
2127012
AAAT
13
-
3
TATT
Y37E3.17a
2128590
2145971
+
Intergenic
-1578
chrI
2127135
2127147
AATAT
12
-
2
ATATT
Y37E3.17a
2128590
2145971
+
Intergenic
-1443