Showing repeats of Caenorhabditis elegans (Roundworm)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 4751 to 4775 repeats of 110476
Go To:
<<
<
189
190
191
192
193
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrI
3517043
3517057
AAAATT
14
-
2
AATTTT
Y47G6A.6
3516450
3523387
+
Intron
593
chrI
3517052
3517064
AAATTT
12
+
2
TTTAAA
Y47G6A.6
3516450
3523387
+
Intron
602
chrI
3517260
3517272
AAAAAT
12
-
2
TTATTT
Y47G6A.6
3516450
3523387
+
Intron
810
chrI
3517567
3517579
AAAAAT
12
+
2
AAATAA
Y47G6A.6
3516450
3523387
+
Intron
1117
chrI
3519214
3519226
AAAGAT
12
-
2
CTTTAT
Y47G6A.6
3516450
3523387
+
Intron
2764
chrI
3520498
3520510
AAAAAT
12
-
2
ATTTTT
Y47G6A.6
3516450
3523387
+
Intron
4048
chrI
3520567
3520579
A
12
-
12
T
Y47G6A.6
3516450
3523387
+
Intron
4117
chrI
3523314
3523328
AAAT
14
-
3
TTTA
Y47G6A.19a
3523313
3529956
-
Exon
6628
chrI
3527988
3528001
AGGC
13
+
3
AGGC
Y47G6A.19a
3523313
3529956
-
Intron
1955
chrI
3528780
3528792
ACTCCT
12
-
2
GAGTAG
Y47G6A.38
3524904
3525115
-
Intergenic
-3665
chrI
3529175
3529188
AAAAAT
13
-
2
TTTTTA
Y47G6A.38
3524904
3525115
-
Intergenic
-4060
chrI
3529314
3529327
AAATT
13
+
2
AAATT
Y47G6A.38
3524904
3525115
-
Intergenic
-4199
chrI
3529398
3529410
A
12
+
12
A
Y47G6A.38
3524904
3525115
-
Intergenic
-4283
chrI
3530539
3530552
AGGC
13
+
3
AGGC
Y47G6A.5a
3533885
3539196
+
Intergenic
-3333
chrI
3530945
3530960
ACT
15
-
5
GTA
Y47G6A.5a
3533885
3539196
+
Intergenic
-2925
chrI
3531758
3531771
AAAAAT
13
+
2
TAAAAA
Y47G6A.5a
3533885
3539196
+
Intergenic
-2114
chrI
3532445
3532461
AAATTT
16
+
2
TAAATT
Y47G6A.5a
3533885
3539196
+
Intergenic
-1424
chrI
3533885
3533899
AC
14
-
7
GT
Y47G6A.5a
3533885
3539196
+
Exon
0
chrI
3533932
3533950
AG
18
-
9
CT
Y47G6A.5a
3533885
3539196
+
Exon
47
chrI
3534328
3534340
AAAAAT
12
-
2
TTATTT
Y47G6A.5a
3533885
3539196
+
Intron
443
chrI
3535121
3535133
AAAAAT
12
+
2
ATAAAA
Y47G6A.5b
3534701
3539156
+
Intron
420
chrI
3535638
3535654
AG
16
-
8
CT
Y47G6A.5b
3534701
3539156
+
Intron
937
chrI
3536439
3536451
AAGTG
12
+
2
GAAGT
Y47G6A.5b
3534701
3539156
+
Exon
1738
chrI
3538957
3538972
AC
15
-
7
TG
Y47G6A.5b
3534701
3539156
+
Exon
4256
chrI
3539206
3539218
AAAT
12
+
3
AATA
Y47G6A.5a
3533885
3539196
+
Intergenic
5321