Showing repeats of Caenorhabditis elegans (Roundworm)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5301 to 5325 repeats of 110476
Go To:
<<
<
211
212
213
214
215
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrI
3973402
3973414
AAATTT
12
+
2
AAATTT
F47B3.1
3972162
3973703
+
Intron
1240
chrI
3975239
3975251
AAAATG
12
-
2
TTTTCA
F28H1.4b.3
3974063
3975741
-
Intron
490
chrI
3975410
3975422
AAGG
12
+
3
GGAA
F28H1.4b.3
3974063
3975741
-
Intron
319
chrI
3975419
3975432
AAATTC
13
-
2
GAATTT
F28H1.4b.3
3974063
3975741
-
Intron
309
chrI
3975787
3975800
AAACTT
13
-
2
TTTAAG
F28H1.4a
3974111
3977262
-
Intron
1462
chrI
3976112
3976130
AAAAAC
18
+
3
AAACAA
F28H1.4a
3974111
3977262
-
Intron
1132
chrI
3977346
3977359
AG
13
-
6
TC
F28H1.4b.1
3974111
3977351
-
Exon
5
chrI
3977801
3977813
AAGAGG
12
+
2
AGGAAG
F28H1.4b.1
3974111
3977351
-
Intergenic
-450
chrI
3979167
3979179
AAAGAG
12
-
2
TTTCTC
F28H1.5
3978493
3979538
-
Exon
359
chrI
3981630
3981644
AT
14
+
7
TA
F28H1.3.1
3983171
3986581
+
Intergenic
-1527
chrI
3982241
3982253
AAGAC
12
+
2
GACAA
F28H1.3.1
3983171
3986581
+
Intergenic
-918
chrI
3983961
3983973
AATTC
12
+
2
ATTCA
F28H1.3.3
3983184
3986581
+
Exon
777
chrI
3984667
3984679
AACTGG
12
+
2
CTGGAA
F28H1.3.3
3983184
3986581
+
Exon
1483
chrI
3985895
3985907
AAAGGC
12
+
2
AAAGGC
F28H1.3.3
3983184
3986581
+
Exon
2711
chrI
3991419
3991431
AAAAAT
12
-
2
TTTTTA
F28H1.2
3987842
3988699
+
Intergenic
3577
chrI
3993649
3993661
AAAGAG
12
-
2
TTCTCT
F28H1.1
3995709
3996950
+
Intergenic
-2048
chrI
3994317
3994330
AAAATT
13
+
2
AAAATT
F28H1.1
3995709
3996950
+
Intergenic
-1379
chrI
3994752
3994766
AAG
14
+
4
GAA
F28H1.1
3995709
3996950
+
Intergenic
-943
chrI
3994905
3994917
AACGT
12
-
2
TTACG
F28H1.1
3995709
3996950
+
Intergenic
-792
chrI
3995285
3995302
AGGC
17
-
4
TGCC
F28H1.1
3995709
3996950
+
Intergenic
-407
chrI
3995980
3995992
AAGCAG
12
+
2
AGCAGA
F28H1.1
3995709
3996950
+
Exon
271
chrI
3996836
3996848
AAAAG
12
-
2
TTTTC
F28H1.1
3995709
3996950
+
Exon
1127
chrI
3997201
3997213
AAAATT
12
-
2
AATTTT
F28H1.1
3995709
3996950
+
Intergenic
1492
chrI
3997323
3997340
C
17
-
17
G
F28H1.1
3995709
3996950
+
Intergenic
1614
chrI
3997708
3997720
AAAACG
12
-
2
TTTTCG
F28H1.1
3995709
3996950
+
Intergenic
1999