Showing repeats of Caenorhabditis elegans (Roundworm)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6451 to 6475 repeats of 110476
Go To:
<<
<
257
258
259
260
261
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrI
4918095
4918107
AACATG
12
+
2
CATGAA
F21F3.7
4918372
4920770
+
Intergenic
-265
chrI
4918979
4918995
AAAAT
16
+
3
TAAAA
F21F3.7
4918372
4920770
+
Intron
607
chrI
4921174
4921188
AAAAT
14
+
2
AAAAT
F28B3.8
4920707
4926233
-
Exon
5045
chrI
4921179
4921191
AAAAAT
12
+
2
AAAATA
F28B3.8
4920707
4926233
-
Exon
5042
chrI
4922107
4922121
AAT
14
+
4
AAT
F28B3.8
4920707
4926233
-
Intron
4112
chrI
4922320
4922335
AAAATT
15
+
2
ATTAAA
F28B3.8
4920707
4926233
-
Intron
3898
chrI
4922476
4922488
AAAATT
12
+
2
AAAATT
F28B3.8
4920707
4926233
-
Intron
3745
chrI
4924630
4924642
AAATCC
12
-
2
TTTGGA
F28B3.8
4920707
4926233
-
Exon
1591
chrI
4924682
4924694
AACCAC
12
+
2
CAACCA
F28B3.8
4920707
4926233
-
Intron
1539
chrI
4927530
4927543
AAAAAG
13
+
2
AAGAAA
F28B3.5b
4926648
4927949
+
Exon
882
chrI
4928677
4928689
AAATT
12
-
2
TAATT
F28B3.5a
4926592
4928840
+
Exon
2085
chrI
4929071
4929083
AAAAT
12
+
2
AAAAT
F28B3.9.1
4928654
4932147
+
Intron
417
chrI
4929715
4929727
AAATTC
12
-
2
GAATTT
F28B3.9.2
4929099
4932147
+
Intron
616
chrI
4931032
4931044
AAAATT
12
+
2
TTAAAA
F28B3.9.2
4929099
4932147
+
Intron
1933
chrI
4931361
4931373
AAAACC
12
+
2
AAAACC
F28B3.9.2
4929099
4932147
+
Intron
2262
chrI
4931864
4931878
AAAATT
14
+
2
TTAAAA
F28B3.9.2
4929099
4932147
+
Exon
2765
chrI
4932673
4932685
AACG
12
-
3
TTCG
F28B3.9.1
4928654
4932147
+
Intergenic
4019
chrI
4933704
4933716
AAACAG
12
-
2
TGTTTC
F28B3.4a
4934118
4949307
+
Intergenic
-402
chrI
4933933
4933945
ATATC
12
-
2
GATAT
F28B3.4a
4934118
4949307
+
Intergenic
-173
chrI
4934646
4934658
AAAATC
12
-
2
TTTTGA
F28B3.4b
4934259
4949332
+
Intron
387
chrI
4935871
4935887
AAAAAT
16
+
2
AAAAAT
F28B3.4b
4934259
4949332
+
Intron
1612
chrI
4936180
4936192
AC
12
+
6
AC
F28B3.4b
4934259
4949332
+
Intron
1921
chrI
4937030
4937043
AAAC
13
-
3
GTTT
F28B3.4b
4934259
4949332
+
Intron
2771
chrI
4937720
4937732
AGATGG
12
-
2
CATCTC
F28B3.4b
4934259
4949332
+
Intron
3461
chrI
4938153
4938165
AAAATT
12
-
2
TAATTT
F28B3.4i
4937770
4949307
+
Intron
383