Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 26 to 50 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
32442
32454
AAAAAT
12
-
2
TTTTTA
C9E72_RS00155
30762
33170
+
Genic
1680
NZ_CP028592.1
40329
40341
AACAAT
12
+
2
AATAAC
tnaB
39264
40511
-
Genic
170
NZ_CP028592.1
44697
44710
AAAATG
13
+
2
TGAAAA
mnmE
45031
46395
-
Intergenic
1685
NZ_CP028592.1
47616
47628
AACGTC
12
-
2
GTTGAC
yidC
46501
48147
-
Genic
519
NZ_CP028592.1
49852
49864
CCCCGG
12
+
2
CCCGGC
dnaA
49494
50897
+
Genic
358
NZ_CP028592.1
50525
50537
AACGCC
12
+
2
GCCAAC
dnaA
49494
50897
+
Genic
1031
NZ_CP028592.1
50716
50729
ATCGCC
13
-
2
GATGGC
dnaA
49494
50897
+
Genic
1222
NZ_CP028592.1
53303
53315
ACAGAG
12
-
2
CTCTGT
C9E72_RS00255
53104
55518
+
Genic
199
NZ_CP028592.1
53789
53801
AACAAG
12
+
2
GAACAA
C9E72_RS00255
53104
55518
+
Genic
685
NZ_CP028592.1
54236
54250
ACGGGC
14
-
2
TGCCCG
C9E72_RS00255
53104
55518
+
Genic
1132
NZ_CP028592.1
54578
54590
ATC
12
+
4
CAT
C9E72_RS00255
53104
55518
+
Genic
1474
NZ_CP028592.1
59234
59249
AATACC
15
+
2
ACCAAT
C9E72_RS00280
59163
60410
+
Genic
71
NZ_CP028592.1
59344
59356
ACCTCG
12
-
2
CGAGGT
C9E72_RS00280
59163
60410
+
Genic
181
NZ_CP028592.1
59766
59779
ACGCCC
13
+
2
CCACGC
C9E72_RS00280
59163
60410
+
Genic
603
NZ_CP028592.1
60617
60629
AGCGCC
12
-
2
TGGCGC
C9E72_RS00285
60412
60744
-
Genic
115
NZ_CP028592.1
61126
61138
AGAGCC
12
+
2
CCAGAG
ibpA
61050
61463
+
Genic
76
NZ_CP028592.1
61954
61966
AGCGC
12
+
2
CGCAG
ibpB
61575
62003
+
Genic
379
NZ_CP028592.1
67964
67976
AGCGAT
12
+
2
ATAGCG
C9E72_RS00320
67804
68697
-
Genic
721
NZ_CP028592.1
68837
68850
AAACAT
13
+
2
ACATAA
C9E72_RS00325
68864
70579
+
Intergenic
-14
NZ_CP028592.1
74409
74422
AGCATC
13
+
2
ATCAGC
emrD
73875
75059
-
Genic
637
NZ_CP028592.1
75871
75883
ACAGT
12
+
2
CAGTA
ivbL
75993
76091
+
Intergenic
-110
NZ_CP028592.1
82613
82625
AAAGTT
12
-
2
TTAACT
uhpB
82188
83690
+
Genic
425
NZ_CP028592.1
86152
86164
AGCGCC
12
-
2
GCGCTG
uhpT
85157
86548
+
Genic
995
NZ_CP028592.1
87088
87100
ACTCCC
12
-
2
GGAGTG
adeD
86594
88360
-
Genic
1260
NZ_CP028592.1
88835
88847
ACCACG
12
-
2
TCGTGG
adeD
86594
88360
-
Intergenic
-475