Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1251 to 1275 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2513634
2513648
ATC
14
+
4
ATC
C9E72_RS12970
2512128
2514140
-
Genic
492
NZ_CP028592.1
2518584
2518596
ACCATC
12
-
2
GGTGAT
pdxH
2518253
2518909
+
Genic
331
NZ_CP028592.1
2522278
2522291
ACCCAG
13
+
2
CCAGAC
dtpA
2521989
2523491
-
Genic
1200
NZ_CP028592.1
2522937
2522950
AAACGC
13
+
2
AACGCA
dtpA
2521989
2523491
-
Genic
541
NZ_CP028592.1
2525158
2525170
ACGCCT
12
-
2
AGGCGT
C9E72_RS13035
2524737
2525432
-
Genic
262
NZ_CP028592.1
2526428
2526441
AGCC
13
+
3
GCCA
rsxD
2526060
2527118
-
Genic
677
NZ_CP028592.1
2527964
2527976
AAAGAT
12
-
2
ATCTTT
rsxC
2527119
2529437
-
Genic
1461
NZ_CP028592.1
2529722
2529734
AGCCGC
12
-
2
GCGGCT
rsxB
2529430
2530008
-
Genic
274
NZ_CP028592.1
2529980
2529992
AACGGC
12
+
2
CGGCAA
rsxB
2529430
2530008
-
Genic
16
NZ_CP028592.1
2532191
2532203
AACCGT
12
-
2
ACGGTT
C9E72_RS13080
2532048
2533088
+
Genic
143
NZ_CP028592.1
2533804
2533816
AATGGC
12
-
2
TGCCAT
C9E72_RS13085
2533124
2534125
-
Genic
309
NZ_CP028592.1
2534779
2534791
ATATCC
12
+
2
CCATAT
malY
2534229
2535401
-
Genic
610
NZ_CP028592.1
2535962
2535977
AACAGG
15
+
2
GAACAG
malX
2535411
2537003
-
Genic
1026
NZ_CP028592.1
2537951
2537963
AAACC
12
-
2
TGGTT
malI
2537178
2538206
+
Genic
773
NZ_CP028592.1
2538604
2538616
ACCGCC
12
-
2
CGGTGG
hdhA
2538318
2539085
+
Genic
286
NZ_CP028592.1
2538765
2538777
AAAAAT
12
+
2
AAAATA
hdhA
2538318
2539085
+
Genic
447
NZ_CP028592.1
2542166
2542178
AAGGCG
12
-
2
CTTCGC
uidB
2542105
2543478
+
Genic
61
NZ_CP028592.1
2549903
2549917
AACATG
14
+
2
AACATG
fumC
2549598
2551001
+
Genic
305
NZ_CP028592.1
2552130
2552143
AGCCCC
13
+
2
CCAGCC
rstB
2552003
2553304
-
Genic
1161
NZ_CP028592.1
2554545
2554557
AAGT
12
+
3
GTAA
folM
2554488
2555210
-
Genic
653
NZ_CP028592.1
2554680
2554693
AAAGTG
13
-
2
TTCACT
folM
2554488
2555210
-
Genic
517
NZ_CP028592.1
2555142
2555154
AGGGCG
12
+
2
GCGAGG
folM
2554488
2555210
-
Genic
56
NZ_CP028592.1
2555954
2555967
ACGCGC
13
+
2
ACGCGC
C9E72_RS13175
2555247
2556629
-
Genic
662
NZ_CP028592.1
2560506
2560522
AGCCGC
16
-
2
GCGGCT
pntB
2559826
2561214
+
Genic
680
NZ_CP028592.1
2560965
2560978
ACCGAT
13
+
2
GATACC
pntB
2559826
2561214
+
Genic
1139