Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1 to 25 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1964
1976
ATCGCG
12
+
2
GATCGC
UKMR15_RS00010
1161
2375
-
Genic
-803
NZ_LR595896.1
2010
2023
AGC
13
+
4
AGC
UKMR15_RS00010
1161
2375
-
Genic
-849
NZ_LR595896.1
2026
2041
ACGAGC
15
+
2
CGAGCA
UKMR15_RS00010
1161
2375
-
Genic
-865
NZ_LR595896.1
2195
2207
AAGCCG
12
+
2
GCCGAA
UKMR15_RS00010
1161
2375
-
Genic
-1034
NZ_LR595896.1
3715
3729
ACG
14
+
4
CGA
mnmC
3114
5096
-
Genic
-601
NZ_LR595896.1
4306
4318
ACGCG
12
-
2
TCGCG
mnmC
3114
5096
-
Genic
-1192
NZ_LR595896.1
4637
4651
ACGCTC
14
-
2
GAGCGT
mnmC
3114
5096
-
Genic
-1523
NZ_LR595896.1
5932
5946
ACGATC
14
-
2
TCGTGA
UKMR15_RS00025
5869
7209
-
Genic
-63
NZ_LR595896.1
6435
6447
AAGGCC
12
-
2
TTGGCC
UKMR15_RS00025
5869
7209
-
Genic
-566
NZ_LR595896.1
6634
6646
ACGCCG
12
-
2
GCGTCG
UKMR15_RS00025
5869
7209
-
Genic
-765
NZ_LR595896.1
6883
6895
ATCGGC
12
+
2
ATCGGC
UKMR15_RS00025
5869
7209
-
Genic
-1014
NZ_LR595896.1
7408
7420
ATCGC
12
-
2
ATGCG
UKMR15_RS00030
7528
8013
-
Intergenic
108
NZ_LR595896.1
8407
8419
AAAGC
12
-
2
GCTTT
gspD
8395
10668
+
Genic
-12
NZ_LR595896.1
8468
8480
ACGCTC
12
+
2
CGCTCA
gspD
8395
10668
+
Genic
-73
NZ_LR595896.1
8987
9001
AATGCG
14
+
2
GAATGC
gspD
8395
10668
+
Genic
-592
NZ_LR595896.1
9468
9481
AAGGAC
13
+
2
GACAAG
gspD
8395
10668
+
Genic
-1073
NZ_LR595896.1
10597
10610
CCCGCG
13
+
2
CGCCCG
gspD
8395
10668
+
Genic
-2202
NZ_LR595896.1
13097
13111
ACGCGC
14
-
2
CGTGCG
gspF
12163
13380
+
Genic
-934
NZ_LR595896.1
13415
13427
AAGCG
12
+
2
CGAAG
UKMR15_RS00050
13452
13862
-
Intergenic
25
NZ_LR595896.1
13629
13641
CCGCG
12
+
2
GCCGC
UKMR15_RS00050
13452
13862
-
Genic
-177
NZ_LR595896.1
13742
13756
CCG
14
-
4
GGC
UKMR15_RS00050
13452
13862
-
Genic
-290
NZ_LR595896.1
14277
14289
ATCCG
12
+
2
CCGAT
gspG
14010
14462
+
Genic
-267
NZ_LR595896.1
14719
14731
ACGCTC
12
+
2
CGCTCA
UKMR15_RS00060
14497
15096
+
Genic
-222
NZ_LR595896.1
15107
15122
CCCCG
15
+
3
CCCGC
gspI
15093
15503
+
Genic
-14
NZ_LR595896.1
16114
16126
CCG
12
+
4
CGC
UKMR15_RS00070
15481
16209
+
Genic
-633