Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3151 to 3175 repeats of 1284974
Go To:
<<
<
125
126
127
128
129
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
1630777
1630791
A
14
-
14
T
ENSGALT00000089053.2
1619961
1634964
-
Intron
4173
chr1
1631248
1631261
ACTGAG
13
+
2
ACTGAG
ENSGALT00000089053.2
1619961
1634964
-
Intron
3703
chr1
1635731
1635743
ACATAG
12
+
2
GACATA
ENSGALT00000013228.6
1619330
1638533
-
Intron
2790
chr1
1636794
1636812
ACC
18
+
6
CCA
ENSGALT00000013228.6
1619330
1638533
-
Intron
1721
chr1
1637059
1637071
AATAT
12
+
2
TATAA
ENSGALT00000047656.2
1619686
1638626
-
Intron
1555
chr1
1638979
1638992
ACCTGG
13
-
2
CAGGTC
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-353
chr1
1639316
1639331
AAAAGG
15
+
2
AAAGGA
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-690
chr1
1639921
1639934
AGAGGG
13
+
2
AGAGGG
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-1295
chr1
1640293
1640308
AAAC
15
-
3
TTTG
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-1667
chr1
1640781
1640799
AAAAAT
18
-
3
ATTTTT
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-2155
chr1
1641801
1641815
AATAGG
14
-
2
TCCTAT
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3175
chr1
1641817
1641830
AATAG
13
-
2
TTCTA
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3191
chr1
1641887
1641900
AATGG
13
-
2
ATTCC
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3261
chr1
1641936
1641948
AATGG
12
-
2
CCATT
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3310
chr1
1641968
1641982
AATGGG
14
-
2
CATTCC
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3342
chr1
1642032
1642091
AATGG
59
-
11
TTCCA
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3406
chr1
1642098
1642112
AATAG
14
-
2
ATTCT
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3472
chr1
1642134
1642146
AATAGG
12
-
2
TATTCC
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3508
chr1
1642270
1642287
AATAGG
17
-
2
CTATTC
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3644
chr1
1642331
1642344
ACCACT
13
+
2
CCACTA
ENSGALT00000047656.2
1619686
1638626
-
Intergenic
-3705
chr1
1644671
1644684
AATT
13
+
3
TTAA
ENSGALT00000013244.7
1649616
1654200
+
Intergenic
-4932
chr1
1645951
1645963
AGG
12
-
4
CTC
ENSGALT00000013244.7
1649616
1654200
+
Intergenic
-3653
chr1
1646014
1646027
ACCATC
13
+
2
CACCAT
ENSGALT00000013244.7
1649616
1654200
+
Intergenic
-3589
chr1
1646094
1646108
AAGAGG
14
-
2
TCTTCC
ENSGALT00000013244.7
1649616
1654200
+
Intergenic
-3508
chr1
1646103
1646117
AGG
14
-
4
TCC
ENSGALT00000013244.7
1649616
1654200
+
Intergenic
-3499