Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5826 to 5850 repeats of 1284974
Go To:
<<
<
232
233
234
235
236
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
4302427
4302442
A
15
-
15
T
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-11652
chr1
4302521
4302533
AACTG
12
+
2
CTGAA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-11746
chr1
4305347
4305360
A
13
+
13
A
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-14572
chr1
4305426
4305438
AGGGGG
12
+
2
GGGGAG
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-14651
chr1
4305842
4305854
AAATTC
12
+
2
CAAATT
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-15067
chr1
4306094
4306106
AAAACC
12
+
2
CAAAAC
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-15319
chr1
4306100
4306115
AAAAC
15
+
3
CAAAA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-15325
chr1
4307047
4307060
ACACAG
13
-
2
TCTGTG
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-16272
chr1
4309107
4309126
A
19
+
19
A
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-18332
chr1
4309321
4309333
AAGAGT
12
+
2
AAGAGT
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-18546
chr1
4309506
4309518
AAATGG
12
+
2
GGAAAT
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-18731
chr1
4309898
4309910
AAATAG
12
+
2
GAAATA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-19123
chr1
4310506
4310518
ACTATG
12
-
2
TCATAG
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-19731
chr1
4311316
4311335
A
19
+
19
A
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-20541
chr1
4311336
4311352
A
16
+
16
A
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-20561
chr1
4312017
4312128
AGAGG
111
+
22
GAGAG
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-21242
chr1
4312121
4312134
AGAGGG
13
+
2
GGAGAG
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-21346
chr1
4312127
4312144
AGAGG
17
+
3
GGAGA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-21352
chr1
4312145
4312236
AGAGG
91
+
18
GAGGA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-21370
chr1
4313293
4313306
ATCCG
13
-
2
CGGAT
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-22518
chr1
4313393
4313406
CCCCCG
13
+
2
CCGCCC
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-22618
chr1
4314091
4314104
ATATC
13
-
2
TATGA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-23316
chr1
4315339
4315351
ACCCTG
12
+
2
CCTGAC
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-24564
chr1
4316088
4316100
AAAGGC
12
-
2
CTTTGC
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-25313
chr1
4317528
4317540
ACTATC
12
+
2
CTATCA
ENSGALT00000048638.2
4260357
4290775
-
Intergenic
-26753