Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9276 to 9300 repeats of 1284974
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
7006752
7006764
ACAGAG
12
-
2
TCTCTG
ENSGALT00000072279.2
6924409
7137384
+
Intron
82343
chr1
7007427
7007442
C
15
-
15
G
ENSGALT00000072279.2
6924409
7137384
+
Intron
83018
chr1
7007827
7007839
AAATGG
12
+
2
TGGAAA
ENSGALT00000072279.2
6924409
7137384
+
Intron
83418
chr1
7008200
7008215
AAAAAG
15
-
2
TTTCTT
ENSGALT00000072279.2
6924409
7137384
+
Intron
83791
chr1
7013248
7013260
AAAACC
12
-
2
TTTTGG
ENSGALT00000072279.2
6924409
7137384
+
Intron
88839
chr1
7013487
7013499
AAATAT
12
-
2
TATATT
ENSGALT00000072279.2
6924409
7137384
+
Intron
89078
chr1
7013645
7013657
AAATC
12
-
2
TTTGA
ENSGALT00000072279.2
6924409
7137384
+
Intron
89236
chr1
7014901
7014915
AAATT
14
+
2
TTAAA
ENSGALT00000072279.2
6924409
7137384
+
Intron
90492
chr1
7015320
7015332
AACTG
12
+
2
CTGAA
ENSGALT00000072279.2
6924409
7137384
+
Intron
90911
chr1
7016152
7016165
AAAGCC
13
+
2
AAGCCA
ENSGALT00000072279.2
6924409
7137384
+
Intron
91743
chr1
7018429
7018443
AACAGG
14
+
2
AGGAAC
ENSGALT00000072279.2
6924409
7137384
+
Intron
94020
chr1
7019421
7019434
AACAGC
13
-
2
TGTTGC
ENSGALT00000072279.2
6924409
7137384
+
Intron
95012
chr1
7020067
7020079
ACCAGG
12
-
2
GTCCTG
ENSGALT00000072279.2
6924409
7137384
+
Intron
95658
chr1
7020759
7020776
ATGCC
17
+
3
GCCAT
ENSGALT00000072279.2
6924409
7137384
+
Intron
96350
chr1
7020881
7020893
AAATAT
12
+
2
AAATAT
ENSGALT00000072279.2
6924409
7137384
+
Intron
96472
chr1
7021917
7021930
ACTGGC
13
-
2
GTGCCA
ENSGALT00000072279.2
6924409
7137384
+
Intron
97508
chr1
7023165
7023177
A
12
-
12
T
ENSGALT00000072279.2
6924409
7137384
+
Intron
98756
chr1
7023846
7023858
AAGGGC
12
+
2
AGGGCA
ENSGALT00000072279.2
6924409
7137384
+
Intron
99437
chr1
7023891
7023903
ACCCCC
12
-
2
GGTGGG
ENSGALT00000072279.2
6924409
7137384
+
Intron
99482
chr1
7025286
7025298
ACCATC
12
-
2
GTGATG
ENSGALT00000072279.2
6924409
7137384
+
Intron
100877
chr1
7029175
7029187
AAATT
12
+
2
AATTA
ENSGALT00000072279.2
6924409
7137384
+
Intron
104766
chr1
7030712
7030724
ATCGGC
12
+
2
CGGCAT
ENSGALT00000072279.2
6924409
7137384
+
Intron
106303
chr1
7031473
7031485
AGATGG
12
+
2
AGATGG
ENSGALT00000072279.2
6924409
7137384
+
Intron
107064
chr1
7031795
7031807
AAATC
12
-
2
TGATT
ENSGALT00000072279.2
6924409
7137384
+
Intron
107386
chr1
7033190
7033202
AAAC
12
+
3
AAAC
ENSGALT00000072279.2
6924409
7137384
+
Intron
108781