Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 262551 to 262575 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrY
3149328
3149341
AAAATT
13
-
2
TTTTAA
FBtr0347458
3137617
3138026
-
Intergenic
-11302
chrY
3150403
3150415
AAAAC
12
-
2
TTTTG
FBtr0347458
3137617
3138026
-
Intergenic
-12377
chrY
3150496
3150508
ACATAT
12
-
2
TGTATA
FBtr0347458
3137617
3138026
-
Intergenic
-12470
chrY
3151322
3151334
ACATAT
12
+
2
TATACA
FBtr0347458
3137617
3138026
-
Intergenic
-13296
chrY
3151415
3151427
AAAAC
12
+
2
AACAA
FBtr0347458
3137617
3138026
-
Intergenic
-13389
chrY
3152725
3152738
AAAATT
13
+
2
ATTAAA
FBtr0347439
3164949
3165401
+
Intergenic
-12211
chrY
3156089
3156101
AGGCC
12
+
2
CAGGC
FBtr0347439
3164949
3165401
+
Intergenic
-8848
chrY
3159803
3159841
A
38
+
38
A
FBtr0347439
3164949
3165401
+
Intergenic
-5108
chrY
3159934
3159947
AAAAAT
13
+
2
AAAAAT
FBtr0347439
3164949
3165401
+
Intergenic
-5002
chrY
3161241
3161259
AAT
18
-
6
TAT
FBtr0347439
3164949
3165401
+
Intergenic
-3690
chrY
3161502
3161515
AAAC
13
+
3
AACA
FBtr0347439
3164949
3165401
+
Intergenic
-3434
chrY
3163530
3163542
AATAC
12
+
2
AATAC
FBtr0347439
3164949
3165401
+
Intergenic
-1407
chrY
3163652
3163664
AAAAAC
12
-
2
TTTTTG
FBtr0347439
3164949
3165401
+
Intergenic
-1285
chrY
3164056
3164069
ACCTCG
13
-
2
GAGGTC
FBtr0347439
3164949
3165401
+
Intergenic
-880
chrY
3165410
3165422
ACCGGT
12
+
2
ACCGGT
FBtr0347457
3165390
3166079
-
Exon
657
chrY
3165909
3165921
AACAAG
12
-
2
TTCTTG
FBtr0347457
3165390
3166079
-
Exon
158
chrY
3166519
3166531
AAATT
12
+
2
ATTAA
FBtr0347457
3165390
3166079
-
Intergenic
-440
chrY
3166569
3166584
AAGCT
15
+
3
CTAAG
FBtr0347457
3165390
3166079
-
Intergenic
-490
chrY
3167068
3167080
ACCACT
12
-
2
TGGTAG
FBtr0347456
3167772
3168037
-
Intergenic
957
chrY
3167118
3167133
AAAT
15
+
3
AATA
FBtr0347456
3167772
3168037
-
Intergenic
904
chrY
3167420
3167434
AAT
14
-
4
ATT
FBtr0347456
3167772
3168037
-
Intergenic
603
chrY
3167674
3167687
AAAC
13
+
3
AACA
FBtr0347456
3167772
3168037
-
Intergenic
350
chrY
3167732
3167745
AGG
13
-
4
CTC
FBtr0347456
3167772
3168037
-
Intergenic
292
chrY
3168077
3168089
AAAAGG
12
+
2
AAAAGG
FBtr0347456
3167772
3168037
-
Intergenic
-40
chrY
3168764
3168776
AACTG
12
+
2
AACTG
FBtr0347456
3167772
3168037
-
Intergenic
-727