Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 262601 to 262625 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chrY
3193172
3193184
AAGTGT
12
-
2
TTACAC
FBtr0347453
3191215
3191491
-
Intergenic
-1681
chrY
3193240
3193254
AAAT
14
+
3
AAAT
FBtr0347453
3191215
3191491
-
Intergenic
-1749
chrY
3194396
3194408
AACTG
12
-
2
TTCAG
FBtr0347453
3191215
3191491
-
Intergenic
-2905
chrY
3195041
3195054
AGG
13
+
4
GGA
FBtr0347453
3191215
3191491
-
Intergenic
-3550
chrY
3195099
3195112
AAAC
13
-
3
TTGT
FBtr0347453
3191215
3191491
-
Intergenic
-3608
chrY
3195365
3195383
AAT
18
+
6
ATA
FBtr0347453
3191215
3191491
-
Intergenic
-3874
chrY
3196396
3196408
AAAAAC
12
-
2
TTTTTG
FBtr0347453
3191215
3191491
-
Intergenic
-4905
chrY
3196505
3196520
AAGCT
15
-
3
CTTAG
FBtr0347453
3191215
3191491
-
Intergenic
-5014
chrY
3196560
3196572
AAATT
12
-
2
ATTTA
FBtr0347453
3191215
3191491
-
Intergenic
-5069
chrY
3196726
3196738
AACTT
12
+
2
TAACT
FBtr0347453
3191215
3191491
-
Intergenic
-5235
chrY
3200084
3200097
AAACTC
13
+
2
CAAACT
FBtr0347441
3203123
3203840
+
Intergenic
-3026
chrY
3201023
3201035
AAGGCG
12
-
2
CTTCGC
FBtr0347441
3203123
3203840
+
Intergenic
-2088
chrY
3201610
3201622
ACCGTC
12
+
2
CACCGT
FBtr0347441
3203123
3203840
+
Intergenic
-1501
chrY
3201631
3201643
ACCCG
12
+
2
CCGAC
FBtr0347441
3203123
3203840
+
Intergenic
-1480
chrY
3202570
3202582
AACTT
12
+
2
TAACT
FBtr0347441
3203123
3203840
+
Intergenic
-541
chrY
3202607
3202620
AAAGCT
13
+
2
AGCTAA
FBtr0347441
3203123
3203840
+
Intergenic
-503
chrY
3205795
3205808
AACTGC
13
+
2
TGCAAC
FBtr0347442
3205803
3205967
+
Exon
5
chrY
3206299
3206312
AAC
13
-
4
TGT
FBtr0347442
3205803
3205967
+
Intergenic
496
chrY
3206605
3206617
AATAGT
12
-
2
TTACTA
FBtr0347442
3205803
3205967
+
Intergenic
802
chrY
3206914
3206927
A
13
-
13
T
FBtr0347442
3205803
3205967
+
Intergenic
1111
chrY
3207029
3207041
A
12
-
12
T
FBtr0347442
3205803
3205967
+
Intergenic
1226
chrY
3207438
3207450
AAACTT
12
-
2
TTTAAG
FBtr0347442
3205803
3205967
+
Intergenic
1635
chrY
3207570
3207583
AAAC
13
-
3
TGTT
FBtr0347442
3205803
3205967
+
Intergenic
1767
chrY
3207583
3207596
AAAGGT
13
+
2
AAGGTA
FBtr0347442
3205803
3205967
+
Intergenic
1780
chrY
3213309
3213321
AACAAG
12
-
2
TTCTTG
FBtr0347451
3212762
3213536
-
Exon
215