Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2951 to 2975 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1695694
1695707
ACCGCC
13
+
2
CACCGC
FBtr0077878
1667847
1697837
+
Exon
27847
chr2L
1696088
1696100
AGCGGC
12
+
2
GGCAGC
FBtr0077878
1667847
1697837
+
Exon
28241
chr2L
1696399
1696414
AGC
15
+
5
AGC
FBtr0077878
1667847
1697837
+
Exon
28552
chr2L
1696521
1696535
AACCAC
14
+
2
ACCACA
FBtr0077878
1667847
1697837
+
Exon
28674
chr2L
1696691
1696703
ACGAGG
12
+
2
CGAGGA
FBtr0077878
1667847
1697837
+
Exon
28844
chr2L
1697125
1697137
ACGTGC
12
+
2
CACGTG
FBtr0077878
1667847
1697837
+
Exon
29278
chr2L
1697300
1697324
AAACC
24
+
4
CCAAA
FBtr0077878
1667847
1697837
+
Exon
29453
chr2L
1698617
1698629
A
12
+
12
A
FBtr0303934
1667847
1698617
+
Exon
30770
chr2L
1699027
1699043
AGAGG
16
+
3
GGAGA
FBtr0307047
1651258
1704682
+
Exon
47769
chr2L
1699252
1699267
AGATGC
15
+
2
AGATGC
FBtr0303933
1651258
1698617
+
Intergenic
47994
chr2L
1699432
1699446
AATAGC
14
+
2
AGCAAT
FBtr0303935
1651258
1698617
+
Intergenic
48174
chr2L
1700034
1700049
AGCT
15
+
3
TAGC
FBtr0077877
1651258
1698617
+
Intergenic
48776
chr2L
1700843
1700856
AAATT
13
+
2
ATTAA
FBtr0307047
1651258
1704682
+
Exon
49585
chr2L
1701241
1701253
AAAACT
12
+
2
CTAAAA
FBtr0307047
1651258
1704682
+
Exon
49983
chr2L
1701283
1701296
ACAGT
13
+
2
GTACA
FBtr0307047
1651258
1704682
+
Exon
50025
chr2L
1701770
1701785
ATCCCC
15
+
2
TCCCCA
FBtr0307047
1651258
1704682
+
Exon
50512
chr2L
1701920
1701932
AT
12
+
6
AT
FBtr0307047
1651258
1704682
+
Exon
50662
chr2L
1702101
1702114
A
13
+
13
A
FBtr0307047
1651258
1704682
+
Exon
50843
chr2L
1702341
1702353
AACTG
12
-
2
CAGTT
FBtr0307047
1651258
1704682
+
Exon
51083
chr2L
1702689
1702702
AAAATT
13
+
2
AAATTA
FBtr0307047
1651258
1704682
+
Exon
51431
chr2L
1703189
1703201
A
12
+
12
A
FBtr0307047
1651258
1704682
+
Exon
51931
chr2L
1703248
1703262
A
14
+
14
A
FBtr0307047
1651258
1704682
+
Exon
51990
chr2L
1703686
1703701
AC
15
+
7
AC
FBtr0307047
1651258
1704682
+
Exon
52428
chr2L
1703740
1703752
AAAATG
12
+
2
AAATGA
FBtr0307047
1651258
1704682
+
Exon
52482
chr2L
1704021
1704033
AATTAT
12
+
2
AATTAT
FBtr0307047
1651258
1704682
+
Exon
52763