Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2976 to 3000 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
1704297
1704309
ACT
12
+
4
CTA
FBtr0307047
1651258
1704682
+
Exon
53039
chr2L
1704424
1704438
ACAT
14
-
3
GTAT
FBtr0307047
1651258
1704682
+
Exon
53166
chr2L
1704776
1704788
AAGT
12
+
3
GTAA
FBtr0307047
1651258
1704682
+
Intergenic
53518
chr2L
1705545
1705557
AAGGAC
12
+
2
CAAGGA
FBtr0331630
1705131
1706962
+
Exon
414
chr2L
1705982
1705995
AGCAGG
13
+
2
AGCAGG
FBtr0331630
1705131
1706962
+
Exon
851
chr2L
1706360
1706373
AAATAT
13
+
2
ATAAAT
FBtr0331630
1705131
1706962
+
Exon
1229
chr2L
1706780
1706793
AAACAC
13
-
2
TTTGTG
FBtr0331630
1705131
1706962
+
Exon
1649
chr2L
1707077
1707091
ATATC
14
+
2
CATAT
FBtr0077912
1707132
1710421
-
Intergenic
3330
chr2L
1707628
1707642
AGCGC
14
+
2
CAGCG
FBtr0077912
1707132
1710421
-
Exon
2779
chr2L
1708065
1708079
AAGACG
14
-
2
TCGTCT
FBtr0077912
1707132
1710421
-
Exon
2342
chr2L
1708302
1708315
AAACGC
13
+
2
ACGCAA
FBtr0077912
1707132
1710421
-
Exon
2106
chr2L
1708744
1708762
AACTAT
18
+
3
CTATAA
FBtr0344040
1708452
1709244
+
Intron
292
chr2L
1709687
1709699
AAGGAC
12
-
2
CCTTGT
FBtr0077912
1707132
1710421
-
Exon
722
chr2L
1710154
1710166
AATTAG
12
-
2
TAATTC
FBtr0077912
1707132
1710421
-
Intron
255
chr2L
1710184
1710196
ACC
12
-
4
GTG
FBtr0077912
1707132
1710421
-
Intron
225
chr2L
1711163
1711175
ACCTGC
12
-
2
TGCAGG
FBtr0333542
1710462
1711365
+
Exon
701
chr2L
1711262
1711274
ACC
12
+
4
CCA
FBtr0333542
1710462
1711365
+
Exon
800
chr2L
1711788
1711803
AGG
15
+
5
GAG
FBtr0333545
1711302
1715851
-
Exon
4048
chr2L
1712730
1712742
AAGATC
12
-
2
TTGATC
FBtr0333545
1711302
1715851
-
Exon
3109
chr2L
1713176
1713188
AAGCAG
12
+
2
AGAAGC
FBtr0333545
1711302
1715851
-
Exon
2663
chr2L
1713531
1713543
AGC
12
+
4
CAG
FBtr0333545
1711302
1715851
-
Exon
2308
chr2L
1715439
1715453
AGCAGG
14
-
2
CTGCTC
FBtr0333545
1711302
1715851
-
Exon
398
chr2L
1715619
1715631
AGATCG
12
-
2
CTCGAT
FBtr0333545
1711302
1715851
-
Exon
220
chr2L
1715801
1715814
AAAAT
13
+
2
AAAAT
FBtr0333545
1711302
1715851
-
Exon
37
chr2L
1716196
1716209
AAGAT
13
+
2
TAAGA
FBtr0305618
1716244
1724388
-
Intergenic
8179