Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3926 to 3950 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
2334404
2334416
AAAAAT
12
+
2
TAAAAA
FBtr0344663
2311680
2358944
+
Intron
22724
chr2L
2334446
2334458
AAAT
12
+
3
TAAA
FBtr0344663
2311680
2358944
+
Intron
22766
chr2L
2334917
2334929
AGGG
12
-
3
TCCC
FBtr0100648
2308761
2357356
-
Intron
22427
chr2L
2335507
2335520
AAGCTT
13
+
2
GCTTAA
FBtr0100648
2308761
2357356
-
Intron
21836
chr2L
2336264
2336278
ACAT
14
-
3
ATGT
FBtr0100648
2308761
2357356
-
Intron
21078
chr2L
2336856
2336868
AAACTC
12
+
2
CAAACT
FBtr0100648
2308761
2357356
-
Intron
20488
chr2L
2337073
2337086
AC
13
+
6
CA
FBtr0100648
2308761
2357356
-
Intron
20270
chr2L
2337190
2337204
ACAG
14
-
3
TGTC
FBtr0100648
2308761
2357356
-
Intron
20152
chr2L
2337665
2337677
ACCC
12
-
3
GTGG
FBtr0100648
2308761
2357356
-
Intron
19679
chr2L
2338202
2338222
AATATC
20
+
3
CAATAT
FBtr0100648
2308761
2357356
-
Intron
19134
chr2L
2338672
2338685
AAATT
13
+
2
ATTAA
FBtr0100648
2308761
2357356
-
Intron
18671
chr2L
2339556
2339570
AACCCG
14
+
2
AACCCG
FBtr0344663
2311680
2358944
+
Exon
27876
chr2L
2339603
2339616
AATCGG
13
+
2
GAATCG
FBtr0344663
2311680
2358944
+
Exon
27923
chr2L
2339618
2339630
AATCGG
12
+
2
TCGGAA
FBtr0344663
2311680
2358944
+
Exon
27938
chr2L
2339625
2339641
AAACGG
16
+
2
CGGAAA
FBtr0344663
2311680
2358944
+
Exon
27945
chr2L
2339841
2339853
AAAGTG
12
+
2
AAAGTG
FBtr0344663
2311680
2358944
+
Exon
28161
chr2L
2340482
2340497
ATC
15
+
5
CAT
FBtr0344663
2311680
2358944
+
Exon
28802
chr2L
2341913
2341925
AATGCT
12
-
2
GCATTA
FBtr0100648
2308761
2357356
-
Intron
15431
chr2L
2343589
2343603
AC
14
+
7
AC
FBtr0100648
2308761
2357356
-
Intron
13753
chr2L
2343734
2343747
AC
13
+
6
CA
FBtr0100648
2308761
2357356
-
Intron
13609
chr2L
2343896
2343914
AAGAT
18
+
3
ATAAG
FBtr0100648
2308761
2357356
-
Intron
13442
chr2L
2344153
2344166
ACTCGC
13
+
2
GCACTC
FBtr0100648
2308761
2357356
-
Intron
13190
chr2L
2344222
2344234
AAAACC
12
-
2
TTTTGG
FBtr0100648
2308761
2357356
-
Intron
13122
chr2L
2344473
2344486
AGCC
13
+
3
CCAG
FBtr0100648
2308761
2357356
-
Intron
12870
chr2L
2344491
2344504
AAAAGG
13
-
2
CTTTTC
FBtr0100648
2308761
2357356
-
Intron
12852