Showing repeats of Drosophila melanogaster (Fruit fly)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 3951 to 3975 repeats of 264324
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr2L
2345112
2345129
A
17
-
17
T
FBtr0100648
2308761
2357356
-
Intron
12227
chr2L
2345397
2345410
AAAAAC
13
+
2
AAACAA
FBtr0100648
2308761
2357356
-
Intron
11946
chr2L
2345843
2345855
AGGC
12
+
3
CAGG
FBtr0100648
2308761
2357356
-
Intron
11501
chr2L
2346550
2346563
AAATT
13
+
2
AAATT
FBtr0100648
2308761
2357356
-
Intron
10793
chr2L
2347087
2347099
AACTGG
12
-
2
CAGTTC
FBtr0344663
2311680
2358944
+
Exon
35407
chr2L
2347574
2347586
A
12
-
12
T
FBtr0100648
2308761
2357356
-
Intron
9770
chr2L
2348049
2348061
AATC
12
+
3
AATC
FBtr0100648
2308761
2357356
-
Intron
9295
chr2L
2348629
2348642
AAT
13
+
4
AAT
FBtr0100648
2308761
2357356
-
Intron
8714
chr2L
2348763
2348775
AATAT
12
-
2
TATAT
FBtr0100648
2308761
2357356
-
Intron
8581
chr2L
2348934
2348946
ACGATG
12
+
2
CGATGA
FBtr0100648
2308761
2357356
-
Intron
8410
chr2L
2351267
2351280
C
13
-
13
G
FBtr0100648
2308761
2357356
-
Intron
6076
chr2L
2351357
2351369
AAAG
12
+
3
GAAA
FBtr0100648
2308761
2357356
-
Intron
5987
chr2L
2352572
2352584
AAGTGG
12
+
2
GAAGTG
FBtr0344663
2311680
2358944
+
Exon
40892
chr2L
2352579
2352591
AAGTGC
12
+
2
AAGTGC
FBtr0344663
2311680
2358944
+
Exon
40899
chr2L
2354252
2354264
AAGATC
12
+
2
CAAGAT
FBtr0344663
2311680
2358944
+
Exon
42572
chr2L
2355703
2355717
AACTTC
14
-
2
AAGTTG
FBtr0100648
2308761
2357356
-
Intron
1639
chr2L
2356185
2356197
AAACTC
12
-
2
GTTTGA
FBtr0100648
2308761
2357356
-
Intron
1159
chr2L
2356284
2356296
AGCTGC
12
+
2
TGCAGC
FBtr0100648
2308761
2357356
-
Intron
1060
chr2L
2356633
2356646
AGGCCC
13
-
2
GGCCTG
FBtr0344663
2311680
2358944
+
Exon
44953
chr2L
2357633
2357648
AAATTC
15
+
2
CAAATT
FBtr0344663
2311680
2358944
+
Intron
45953
chr2L
2357701
2357713
ACTCGG
12
+
2
ACTCGG
FBtr0344663
2311680
2358944
+
Exon
46021
chr2L
2358303
2358315
ACAGAT
12
+
2
CAGATA
FBtr0344663
2311680
2358944
+
Exon
46623
chr2L
2359160
2359177
AT
17
+
8
AT
FBtr0077797
2359142
2363504
-
Exon
4327
chr2L
2359215
2359228
AAATTT
13
+
2
TTTAAA
FBtr0077797
2359142
2363504
-
Exon
4276
chr2L
2359338
2359353
AAAT
15
-
3
TTTA
FBtr0077797
2359142
2363504
-
Exon
4151