MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1 to 25 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 516 528 AGATG 12 - 2 TCATC NAC001 3631 5899 + Intergenic -3103
NC_003070.9 1075 1090 C 15 + 15 C NAC001 3631 5899 + Intergenic -2541
NC_003070.9 1170 1187 AAAAAG 17 - 2 TTTTTC NAC001 3631 5899 + Intergenic -2444
NC_003070.9 1349 1361 AGAT 12 - 3 TCTA NAC001 3631 5899 + Intergenic -2270
NC_003070.9 1922 1934 ACATAT 12 + 2 CATATA NAC001 3631 5899 + Intergenic -1697
NC_003070.9 2068 2080 AAAAAT 12 - 2 TATTTT NAC001 3631 5899 + Intergenic -1551
NC_003070.9 3204 3216 AAATAT 12 - 2 ATTTAT NAC001 3631 5899 + Intergenic -415
NC_003070.9 3566 3581 AAAAAT 15 + 2 AAAATA NAC001 3631 5899 + Intergenic -50
NC_003070.9 3772 3785 AAACCC 13 - 2 TTGGGT NAC001 3631 5899 + Exon 141
NC_003070.9 4290 4312 AT 22 + 11 AT NAC001 3631 5899 + Intron 659
NC_003070.9 4316 4328 AT 12 + 6 AT NAC001 3631 5899 + Intron 685
NC_003070.9 7538 7552 AAG 14 + 4 AAG ARV1 6788 9130 - Intron 1578
NC_003070.9 7990 8004 AC 14 + 7 CA ARV1 6788 9130 - Intron 1126
NC_003070.9 8003 8016 A 13 + 13 A ARV1 6788 9130 - Intron 1114
NC_003070.9 8668 8699 AG 31 - 15 CT ARV1 6788 9130 - Exon 431
NC_003070.9 9511 9527 AAAAT 16 - 3 TTATT ARV1 6788 9130 - Intergenic -381
NC_003070.9 9971 9985 AT 14 + 7 AT ARV1 6788 9130 - Intergenic -841
NC_003070.9 10574 10587 AAC 13 + 4 ACA AT1G03987 11101 11372 + Intergenic -514
NC_003070.9 10585 10599 A 14 + 14 A AT1G03987 11101 11372 + Intergenic -502
NC_003070.9 10827 10840 ACATAT 13 + 2 TATACA AT1G03987 11101 11372 + Intergenic -261
NC_003070.9 10992 11008 AAACC 16 + 3 CCAAA AT1G03987 11101 11372 + Intergenic -93
NC_003070.9 11260 11272 AAAC 12 + 3 CAAA AT1G03987 11101 11372 + Genic 159
NC_003070.9 11984 12001 AAG 17 + 5 GAA NGA3 11649 13714 - Exon 1713
NC_003070.9 12397 12413 AAATTG 16 + 2 GAAATT NGA3 11649 13714 - Exon 1301
NC_003070.9 12800 12812 ATC 12 + 4 ATC NGA3 11649 13714 - Exon 902