MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 51 to 75 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 24063 24075 AGAGAT 12 + 2 TAGAGA DCL1 23121 31227 + Exon 942
NC_003070.9 24505 24517 AAAACC 12 - 2 TTGGTT DCL1 23121 31227 + Intron 1384
NC_003070.9 27024 27036 AAAC 12 - 3 GTTT DCL1 23121 31227 + Intron 3903
NC_003070.9 27850 27864 AACATC 14 - 2 GATGTT DCL1 23121 31227 + Exon 4729
NC_003070.9 29081 29096 AT 15 + 7 TA DCL1 23121 31227 + Intron 5960
NC_003070.9 29109 29121 A 12 - 12 T DCL1 23121 31227 + Intron 5988
NC_003070.9 29720 29732 AACATT 12 - 2 AATGTT DCL1 23121 31227 + Exon 6599
NC_003070.9 30311 30327 AACT 16 - 4 GTTA PPa1 31170 33171 - Intergenic 2844
NC_003070.9 30645 30657 AAAGAG 12 + 2 GAAAGA PPa1 31170 33171 - Intergenic 2514
NC_003070.9 30715 30728 AATGAG 13 + 2 GAGAAT PPa1 31170 33171 - Intergenic 2443
NC_003070.9 32065 32080 AAAG 15 + 3 AGAA PPa1 31170 33171 - Intron 1091
NC_003070.9 34886 34898 AGCTCC 12 - 2 TGGAGC LHY 33365 37871 - Exon 2973
NC_003070.9 35388 35401 AAAGAC 13 - 2 TCTTTG LHY 33365 37871 - Exon 2470
NC_003070.9 36698 36711 AAAAG 13 + 2 GAAAA LHY 33365 37871 - Intron 1160
NC_003070.9 37735 37772 AAG 37 + 12 GAA LHY 33365 37871 - Exon 99
NC_003070.9 37800 37814 AAG 14 + 4 GAA LHY 33365 37871 - Exon 57
NC_003070.9 38644 38658 AACCG 14 - 2 GTTCG UMAMIT28 38444 41017 - Exon 2359
NC_003070.9 38890 38902 AAATT 12 + 2 AATTA UMAMIT28 38444 41017 - Exon 2115
NC_003070.9 39678 39698 ACTCTC 20 - 3 GTGAGA UMAMIT28 38444 41017 - Exon 1319
NC_003070.9 40811 40823 ACCATC 12 + 2 CATCAC UMAMIT28 38444 41017 - Exon 194
NC_003070.9 41024 41038 AACGTT 14 + 2 ACGTTA UMAMIT28 38444 41017 - Intergenic -7
NC_003070.9 41360 41385 AT 25 + 12 TA UMAMIT28 38444 41017 - Intergenic -343
NC_003070.9 41551 41567 AT 16 + 8 AT UMAMIT28 38444 41017 - Intergenic -534
NC_003070.9 43876 43888 AATATG 12 - 2 ATATTC AT1G04003 43087 43295 - Intergenic -581
NC_003070.9 44033 44045 AATCAT 12 + 2 TAATCA AT1G04003 43087 43295 - Intergenic -738