MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3326 to 3350 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2316938 2316953 AAAAT 15 - 3 ATTTT SCL14 2313581 2316507 - Intergenic -431
NC_003070.9 2318250 2318272 AAG 22 - 7 TCT TRFL2 2318143 2321664 - Exon 3392
NC_003070.9 2318335 2318350 AAAC 15 + 3 AAAC TRFL2 2318143 2321664 - Exon 3314
NC_003070.9 2319699 2319711 AAATAG 12 + 2 AATAGA TRFL2 2318143 2321664 - Intron 1953
NC_003070.9 2319780 2319792 AAGCTG 12 + 2 AAGCTG TRFL2 2318143 2321664 - Exon 1872
NC_003070.9 2320027 2320039 AAGTCC 12 + 2 CAAGTC TRFL2 2318143 2321664 - Exon 1625
NC_003070.9 2321963 2321976 AAAAT 13 - 2 TTTAT AT1G04593 2321382 2321961 + Intergenic 581
NC_003070.9 2321999 2322012 AAAAT 13 - 2 TATTT AT1G04593 2321382 2321961 + Intergenic 617
NC_003070.9 2322068 2322081 AAACCT 13 + 2 AACCTA AT1G04593 2321382 2321961 + Intergenic 686
NC_003070.9 2322280 2322298 AAG 18 - 6 TCT AT1G07550 2322543 2326570 - Intergenic 4272
NC_003070.9 2323690 2323702 AAAGGG 12 - 2 TTTCCC AT1G07550 2322543 2326570 - Genic 2868
NC_003070.9 2326643 2326655 AAACTT 12 + 2 AAACTT AT1G07550 2322543 2326570 - Intergenic -73
NC_003070.9 2326869 2326881 AATATG 12 + 2 ATATGA AT1G07550 2322543 2326570 - Intergenic -299
NC_003070.9 2327128 2327140 AACAAT 12 - 2 TTATTG AT1G07560 2327315 2331148 + Intergenic -175
NC_003070.9 2327291 2327303 A 12 - 12 T AT1G07560 2327315 2331148 + Intergenic -12
NC_003070.9 2329408 2329422 AACTTC 14 - 2 GTTGAA AT1G07560 2327315 2331148 + Genic 2093
NC_003070.9 2330351 2330363 AAAATG 12 - 2 TCATTT AT1G07560 2327315 2331148 + Genic 3036
NC_003070.9 2330672 2330684 AATCAT 12 + 2 AATCAT AT1G07560 2327315 2331148 + Genic 3357
NC_003070.9 2332863 2332875 ACACAG 12 + 2 ACAGAC APK1A 2331136 2333767 - Exon 892
NC_003070.9 2333686 2333699 AAAACG 13 - 2 TCGTTT APK1A 2331136 2333767 - Exon 68
NC_003070.9 2334007 2334021 AAAAT 14 + 2 TAAAA APK1A 2331136 2333767 - Intergenic -240
NC_003070.9 2334066 2334079 AAAAAG 13 + 2 AAAAGA AT1G04597 2334333 2334599 + Intergenic -254
NC_003070.9 2334157 2334169 AATG 12 - 3 TTCA AT1G04597 2334333 2334599 + Intergenic -164
NC_003070.9 2334174 2334186 AAAAAG 12 - 2 TTTTTC AT1G04597 2334333 2334599 + Intergenic -147
NC_003070.9 2335352 2335364 AATAT 12 - 2 TTATA AT1G07580 2334822 2334894 + Intergenic 530