MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3401 to 3425 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2372519 2372531 AAAAGG 12 + 2 AAAAGG ECA4 2370020 2374607 - Intron 2076
NC_003070.9 2374596 2374609 AAAAAC 13 - 2 TTTGTT ECA4 2370020 2374607 - Exon -2
NC_003070.9 2375384 2375397 AATG 13 - 3 ATTC AT1G07680 2376012 2377186 + Intergenic -615
NC_003070.9 2375977 2375991 AT 14 + 7 TA AT1G07680 2376012 2377186 + Intergenic -21
NC_003070.9 2376569 2376582 AAACC 13 + 2 AACCA AT1G07680 2376012 2377186 + Genic 557
NC_003070.9 2376937 2376949 ACCATG 12 + 2 CCATGA AT1G07680 2376012 2377186 + Genic 925
NC_003070.9 2377471 2377487 A 16 + 16 A AT1G07680 2376012 2377186 + Intergenic 1459
NC_003070.9 2377610 2377635 AT 25 + 12 AT AT1G07690 2377976 2379207 + Intergenic -341
NC_003070.9 2377632 2377647 AGAT 15 + 3 ATAG AT1G07690 2377976 2379207 + Intergenic -329
NC_003070.9 2377640 2377656 AGATAT 16 + 2 ATAGAT AT1G07690 2377976 2379207 + Intergenic -320
NC_003070.9 2377674 2377686 AATACC 12 - 2 GTATTG AT1G07690 2377976 2379207 + Intergenic -290
NC_003070.9 2377873 2377886 A 13 + 13 A AT1G07690 2377976 2379207 + Intergenic -90
NC_003070.9 2379045 2379058 AAAAT 13 - 2 TTTAT AT1G07690 2377976 2379207 + Genic 1069
NC_003070.9 2380660 2380672 AACCAC 12 - 2 TGGTTG AT1G07700 2379595 2381390 + Genic 1065
NC_003070.9 2381273 2381285 AAAC 12 - 3 TTTG AT1G07700 2379595 2381390 + Genic 1678
NC_003070.9 2384533 2384545 AACAAG 12 - 2 GTTCTT AT1G07705 2381555 2386157 + Genic 2978
NC_003070.9 2386504 2386516 AAC 12 + 4 CAA AT1G07710 2386164 2388350 - Genic 1834
NC_003070.9 2388092 2388106 ACCAG 14 - 2 GTCTG AT1G07710 2386164 2388350 - Genic 244
NC_003070.9 2388450 2388462 AAAG 12 + 3 AGAA AT1G07710 2386164 2388350 - Intergenic -100
NC_003070.9 2388563 2388576 AAAACG 13 + 2 AAACGA AT1G07710 2386164 2388350 - Intergenic -213
NC_003070.9 2388849 2388862 AAAGCG 13 - 2 CGCTTT AT1G07710 2386164 2388350 - Intergenic -499
NC_003070.9 2389343 2389355 AAATAT 12 + 2 ATAAAT AT1G07710 2386164 2388350 - Intergenic -993
NC_003070.9 2390006 2390018 AAAATT 12 - 2 AATTTT KCS3 2390531 2392628 - Intergenic 2610
NC_003070.9 2390804 2390819 AAAAAG 15 + 2 AAAAAG KCS3 2390531 2392628 - Exon 1809
NC_003070.9 2390812 2390825 AAAG 13 + 3 AAAG KCS3 2390531 2392628 - Exon 1803