MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3776 to 3800 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2659464 2659476 AATATC 12 - 2 GATATT ALMT1 2658602 2661310 + Exon 862
NC_003070.9 2659695 2659707 AAAAAG 12 - 2 TCTTTT ALMT1 2658602 2661310 + Intron 1093
NC_003070.9 2659736 2659748 ACATAT 12 + 2 ATATAC ALMT1 2658602 2661310 + Intron 1134
NC_003070.9 2660018 2660030 AAACCT 12 - 2 TTTAGG ALMT1 2658602 2661310 + Exon 1416
NC_003070.9 2660253 2660276 AT 23 + 11 TA ALMT1 2658602 2661310 + Intron 1651
NC_003070.9 2662097 2662109 AAAGAG 12 + 2 AGAGAA ALMT1 2658602 2661310 + Intergenic 3495
NC_003070.9 2662133 2662155 A 22 + 22 A AT1G08440 2662967 2665584 + Intergenic -812
NC_003070.9 2662445 2662460 AAAAT 15 - 3 ATTTT AT1G08440 2662967 2665584 + Intergenic -507
NC_003070.9 2663113 2663125 AAGAGC 12 - 2 CTTGCT AT1G08440 2662967 2665584 + Genic 146
NC_003070.9 2663492 2663506 AAAGAC 14 - 2 TCTTTG AT1G08440 2662967 2665584 + Genic 525
NC_003070.9 2663665 2663679 AT 14 + 7 AT AT1G08440 2662967 2665584 + Genic 698
NC_003070.9 2665098 2665112 ATC 14 - 4 ATG AT1G08440 2662967 2665584 + Genic 2131
NC_003070.9 2665160 2665174 AATCGC 14 + 2 CAATCG AT1G08440 2662967 2665584 + Genic 2193
NC_003070.9 2666101 2666113 ACGAGC 12 - 2 GCTCGT AT1G08440 2662967 2665584 + Intergenic 3134
NC_003070.9 2666939 2666951 AAAT 12 + 3 ATAA CRT3 2667798 2671957 - Intergenic 5006
NC_003070.9 2668170 2668199 AAAAC 29 + 5 CAAAA CRT3 2667798 2671957 - Intron 3758
NC_003070.9 2668483 2668496 AAAG 13 - 3 TTTC CRT3 2667798 2671957 - Exon 3461
NC_003070.9 2671525 2671537 AATCCG 12 - 2 GGATTC CRT3 2667798 2671957 - Intron 420
NC_003070.9 2671545 2671557 AAATC 12 + 2 AATCA CRT3 2667798 2671957 - Intron 400
NC_003070.9 2674979 2674993 AAAAT 14 - 2 TTTTA HDA08 2672198 2674721 + Intergenic 2781
NC_003070.9 2675033 2675055 AAATAC 22 + 3 CAAATA HDA08 2672198 2674721 + Intergenic 2835
NC_003070.9 2675869 2675887 AG 18 - 9 TC YAB2 2675813 2679824 + Exon 56
NC_003070.9 2675921 2675933 AAAAT 12 - 2 TTTTA YAB2 2675813 2679824 + Exon 108
NC_003070.9 2676581 2676598 AAAAAT 17 - 2 ATTTTT YAB2 2675813 2679824 + Intron 768
NC_003070.9 2676918 2676930 ACATC 12 + 2 ACATC YAB2 2675813 2679824 + Intron 1105