MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

Filter Panel
-
-

Showing 4826 to 4850 repeats of 170418

Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3477988 3478005 AAAAAG 17 + 2 AAAAAG NAT8 3474858 3478028 - Exon 23
NC_003070.9 3478249 3478262 AAAAAG 13 + 2 AAAAAG NAT8 3474858 3478028 - Intergenic -221
NC_003070.9 3478490 3478504 AAAT 14 - 3 TTAT NAT8 3474858 3478028 - Intergenic -462
NC_003070.9 3478688 3478700 AGATC 12 - 2 TCTGA XTH33 3479066 3481041 - Intergenic 2341
NC_003070.9 3478942 3478956 A 14 - 14 T XTH33 3479066 3481041 - Intergenic 2085
NC_003070.9 3479845 3479858 AAAAAC 13 - 2 TTTGTT XTH33 3479066 3481041 - Intron 1183
NC_003070.9 3479943 3479955 AAATTC 12 + 2 TTCAAA XTH33 3479066 3481041 - Intron 1086
NC_003070.9 3480063 3480078 AAAAGG 15 - 2 CTTTTC XTH33 3479066 3481041 - Intron 963
NC_003070.9 3480227 3480241 AAGAG 14 - 2 CTTCT XTH33 3479066 3481041 - Exon 800
NC_003070.9 3481024 3481037 ACCTCT 13 - 2 TAGAGG XTH33 3479066 3481041 - Exon 4
NC_003070.9 3481320 3481333 AAATC 13 + 2 AATCA XTH33 3479066 3481041 - Intergenic -279
NC_003070.9 3481583 3481595 AC 12 + 6 CA XTH33 3479066 3481041 - Intergenic -542
NC_003070.9 3482550 3482563 AAAC 13 + 3 ACAA XTH33 3479066 3481041 - Intergenic -1509
NC_003070.9 3482568 3482580 ACACCT 12 - 2 GTAGGT XTH33 3479066 3481041 - Intergenic -1527
NC_003070.9 3483136 3483148 AAATG 12 - 2 TCATT PUB18 3484399 3486965 + Intergenic -1251
NC_003070.9 3484131 3484143 AAATGG 12 - 2 TTTCCA PUB18 3484399 3486965 + Intergenic -256
NC_003070.9 3484828 3484840 ATCCGG 12 + 2 CGGATC PUB18 3484399 3486965 + Exon 429
NC_003070.9 3485197 3485209 ATCCGG 12 + 2 CCGGAT PUB18 3484399 3486965 + Exon 798
NC_003070.9 3485312 3485327 AAG 15 + 5 AGA PUB18 3484399 3486965 + Exon 913
NC_003070.9 3486082 3486094 AAGCAG 12 - 2 TCTGCT PUB18 3484399 3486965 + Exon 1683
NC_003070.9 3487471 3487485 AAATTC 14 - 2 AATTTG OTS2 3487386 3491277 + Exon 85
NC_003070.9 3487982 3487994 A 12 - 12 T OTS2 3487386 3491277 + Exon 596
NC_003070.9 3488257 3488269 ACAGAG 12 - 2 CTCTGT OTS2 3487386 3491277 + Exon 871
NC_003070.9 3489229 3489241 AAGATG 12 + 2 GATGAA OTS2 3487386 3491277 + Exon 1843
NC_003070.9 3491144 3491156 AAATG 12 + 2 AATGA OTS2 3487386 3491277 + Exon 3758