MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5401 to 5425 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3877386 3877398 AATT 12 + 3 AATT AT1G11540 3875442 3877323 - Intergenic -63
NC_003070.9 3877529 3877543 AAAAAC 14 - 2 TTTGTT AT1G11540 3875442 3877323 - Intergenic -206
NC_003070.9 3878346 3878359 AATCAC 13 + 2 ATCACA XTH8 3878495 3880391 - Intergenic 2032
NC_003070.9 3878397 3878410 ACAGCT 13 - 2 GTAGCT XTH8 3878495 3880391 - Intergenic 1981
NC_003070.9 3878475 3878488 AACAG 13 - 2 CTGTT XTH8 3878495 3880391 - Intergenic 1903
NC_003070.9 3878574 3878586 AAAT 12 + 3 TAAA XTH8 3878495 3880391 - Exon 1805
NC_003070.9 3879102 3879114 AATCC 12 - 2 TTGGA XTH8 3878495 3880391 - Intron 1277
NC_003070.9 3880313 3880331 AG 18 + 9 AG XTH8 3878495 3880391 - Exon 60
NC_003070.9 3880771 3880783 AAGTGG 12 + 2 AAGTGG XTH8 3878495 3880391 - Intergenic -380
NC_003070.9 3881862 3881874 AATCTG 12 - 2 TCAGAT AT1G11560 3881627 3882819 + Genic 235
NC_003070.9 3882089 3882101 AAC 12 + 4 CAA AT1G11560 3881627 3882819 + Genic 462
NC_003070.9 3882375 3882387 AATCAT 12 + 2 ATAATC AT1G11560 3881627 3882819 + Genic 748
NC_003070.9 3883820 3883832 AAAAT 12 - 2 TTATT NTL 3883167 3884129 + Intron 653
NC_003070.9 3885204 3885216 AAAGAT 12 - 2 TTATCT AT1G11572 3884342 3884960 + Intergenic 862
NC_003070.9 3886019 3886035 AAAAT 16 + 3 AAAAT AT1G11572 3884342 3884960 + Intergenic 1677
NC_003070.9 3886171 3886185 AAAAT 14 + 2 TAAAA AT1G11572 3884342 3884960 + Intergenic 1829
NC_003070.9 3886285 3886305 A 20 + 20 A AT1G11572 3884342 3884960 + Intergenic 1943
NC_003070.9 3886352 3886365 AAAAAT 13 - 2 TTTTAT AT1G11572 3884342 3884960 + Intergenic 2010
NC_003070.9 3886522 3886534 A 12 - 12 T AT1G11572 3884342 3884960 + Intergenic 2180
NC_003070.9 3886652 3886664 A 12 - 12 T AT1G11572 3884342 3884960 + Intergenic 2310
NC_003070.9 3886937 3886949 A 12 - 12 T PMEPCRA 3888610 3890824 + Intergenic -1661
NC_003070.9 3887047 3887060 AAAAT 13 + 2 AAAAT PMEPCRA 3888610 3890824 + Intergenic -1550
NC_003070.9 3887256 3887269 AAGGAT 13 + 2 GATAAG PMEPCRA 3888610 3890824 + Intergenic -1341
NC_003070.9 3887272 3887284 A 12 + 12 A PMEPCRA 3888610 3890824 + Intergenic -1326
NC_003070.9 3887785 3887798 ACCATC 13 + 2 ATCACC PMEPCRA 3888610 3890824 + Intergenic -812