MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 6351 to 6375 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 4517082 4517097 AAGCTG 15 + 2 GAAGCT LINC2 4515464 4520306 + Exon 1618
NC_003070.9 4517095 4517107 AAAAAG 12 + 2 AAAGAA LINC2 4515464 4520306 + Exon 1631
NC_003070.9 4517553 4517566 AAACC 13 - 2 TTTGG LINC2 4515464 4520306 + Exon 2089
NC_003070.9 4518113 4518125 AAAGAG 12 + 2 AAGAGA LINC2 4515464 4520306 + Exon 2649
NC_003070.9 4518197 4518210 AAAAAG 13 + 2 AAGAAA LINC2 4515464 4520306 + Exon 2733
NC_003070.9 4519984 4519997 ATC 13 - 4 GAT LINC2 4515464 4520306 + Exon 4520
NC_003070.9 4520655 4520667 AACAAG 12 - 2 TGTTCT AT1G13230 4520559 4522644 + Genic 96
NC_003070.9 4521008 4521020 AAGCTC 12 - 2 GAGCTT AT1G13230 4520559 4522644 + Genic 449
NC_003070.9 4521361 4521373 AAAAAC 12 - 2 TTTTTG AT1G13230 4520559 4522644 + Genic 802
NC_003070.9 4522244 4522257 AAGGC 13 - 2 TTGCC AT1G13230 4520559 4522644 + Genic 1685
NC_003070.9 4522858 4522898 AAAAC 40 + 8 CAAAA AT1G13240 4522709 4522782 - Intergenic -76
NC_003070.9 4522969 4522982 AAGTCT 13 - 2 TAGACT AT1G13240 4522709 4522782 - Intergenic -187
NC_003070.9 4523141 4523154 AAAAAC 13 + 2 AAACAA AT1G13240 4522709 4522782 - Intergenic -359
NC_003070.9 4525076 4525089 AATT 13 + 3 ATTA MIR8166 4525271 4525360 - Intergenic 271
NC_003070.9 4525201 4525214 AATATT 13 + 2 AATATT MIR8166 4525271 4525360 - Intergenic 146
NC_003070.9 4525339 4525351 AAAATG 12 - 2 TTCATT MIR8166 4525271 4525360 - Exon 9
NC_003070.9 4525349 4525363 AAAAAT 14 - 2 TTATTT MIR8166 4525271 4525360 - Exon -3
NC_003070.9 4525968 4525980 AAGATG 12 - 2 CATCTT RTFL17 4525414 4526204 - Exon 224
NC_003070.9 4526887 4526901 AAG 14 - 4 TTC AT1G04997 4526960 4527364 - Intergenic 463
NC_003070.9 4528304 4528319 A 15 + 15 A GATL3 4528485 4530222 - Intergenic 1903
NC_003070.9 4528732 4528744 AACGGT 12 - 2 CGTTAC GATL3 4528485 4530222 - Exon 1478
NC_003070.9 4529063 4529075 AAAGGG 12 - 2 TTTCCC GATL3 4528485 4530222 - Exon 1147
NC_003070.9 4529979 4529992 AAACGC 13 + 2 AAACGC GATL3 4528485 4530222 - Exon 230
NC_003070.9 4530485 4530498 AAAAG 13 - 2 TTTTC GATL3 4528485 4530222 - Intergenic -263
NC_003070.9 4530562 4530574 AAAGAT 12 + 2 TAAAGA GATL3 4528485 4530222 - Intergenic -340