MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 7176 to 7200 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5050476 5050489 AG 13 + 6 AG AT1G14688 5049526 5050983 - Genic 494
NC_003070.9 5050523 5050536 C 13 - 13 G AT1G14688 5049526 5050983 - Genic 447
NC_003070.9 5051064 5051079 AATC 15 - 3 ATTG AT1G14688 5049526 5050983 - Intergenic -81
NC_003070.9 5051278 5051290 AAACAC 12 + 2 CACAAA AT1G05117 5051298 5051561 + Intergenic -8
NC_003070.9 5051533 5051545 AAAG 12 - 3 CTTT AT1G05117 5051298 5051561 + Genic 235
NC_003070.9 5051597 5051611 AAATCG 14 - 2 TTCGAT AT1G05117 5051298 5051561 + Intergenic 299
NC_003070.9 5053181 5053193 AAG 12 + 4 AGA MAP65-7 5051656 5055299 - Intron 2106
NC_003070.9 5053441 5053453 AAAAG 12 + 2 GAAAA MAP65-7 5051656 5055299 - Intron 1846
NC_003070.9 5055859 5055873 ACTCC 14 + 2 CACTC MAP65-7 5051656 5055299 - Intergenic -560
NC_003070.9 5055910 5055922 AAATT 12 - 2 ATTTA MAP65-7 5051656 5055299 - Intergenic -611
NC_003070.9 5055981 5055993 A 12 - 12 T MAP65-7 5051656 5055299 - Intergenic -682
NC_003070.9 5057262 5057274 AC 12 - 6 GT PAP3 5058583 5061140 + Intergenic -1309
NC_003070.9 5057953 5057965 AAAATC 12 - 2 GATTTT PAP3 5058583 5061140 + Intergenic -618
NC_003070.9 5058486 5058498 AAAAT 12 - 2 TTTAT PAP3 5058583 5061140 + Intergenic -85
NC_003070.9 5059190 5059204 AAT 14 - 4 TTA PAP3 5058583 5061140 + Exon 607
NC_003070.9 5059202 5059214 AAATTG 12 - 2 TTCAAT PAP3 5058583 5061140 + Exon 619
NC_003070.9 5059257 5059269 AAAG 12 + 3 AAAG PAP3 5058583 5061140 + Exon 674
NC_003070.9 5060082 5060094 AAAG 12 - 3 CTTT PAP3 5058583 5061140 + Intron 1499
NC_003070.9 5060660 5060672 AAAT 12 - 3 ATTT PAP3 5058583 5061140 + Exon 2077
NC_003070.9 5061879 5061892 AT 13 + 6 TA AT1G14710 5061694 5065303 - Genic 3411
NC_003070.9 5061950 5061962 AAAGG 12 + 2 GAAAG AT1G14710 5061694 5065303 - Genic 3341
NC_003070.9 5062893 5062905 AAGGAC 12 + 2 GACAAG AT1G14710 5061694 5065303 - Genic 2398
NC_003070.9 5063013 5063026 AAACAG 13 + 2 AAACAG AT1G14710 5061694 5065303 - Genic 2277
NC_003070.9 5063937 5063950 AAAC 13 + 3 ACAA AT1G14710 5061694 5065303 - Genic 1353
NC_003070.9 5064148 5064161 AAGAG 13 - 2 TCTCT AT1G14710 5061694 5065303 - Genic 1142