MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 7276 to 7300 repeats of 170418

Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5125619 5125631 AAGCTC 12 - 2 GAGCTT NUDT18 5124670 5126280 + Exon 949
NC_003070.9 5126413 5126425 ACCATC 12 - 2 TGATGG NUDT18 5124670 5126280 + Intergenic 1743
NC_003070.9 5126625 5126637 AAT 12 - 4 TTA NUDT18 5124670 5126280 + Intergenic 1955
NC_003070.9 5126706 5126718 AGATC 12 - 2 ATCTG NUDT18 5124670 5126280 + Intergenic 2036
NC_003070.9 5126923 5126936 AAACTC 13 + 2 ACTCAA NUDT18 5124670 5126280 + Intergenic 2253
NC_003070.9 5127529 5127543 AATTC 14 - 2 AATTG PCR2 5128344 5129731 - Intergenic 2188
NC_003070.9 5127615 5127629 AAAACC 14 + 2 AAACCA PCR2 5128344 5129731 - Intergenic 2102
NC_003070.9 5128207 5128220 A 13 - 13 T PCR2 5128344 5129731 - Intergenic 1511
NC_003070.9 5129319 5129337 AT 18 + 9 TA PCR2 5128344 5129731 - Intron 394
NC_003070.9 5129460 5129473 AG 13 + 6 AG PCR2 5128344 5129731 - Exon 258
NC_003070.9 5130666 5130678 AT 12 + 6 TA AT1G05127 5131512 5131859 + Intergenic -834
NC_003070.9 5132248 5132262 A 14 + 14 A PCR1 5132506 5133860 - Intergenic 1598
NC_003070.9 5135377 5135389 AAATAT 12 + 2 ATATAA AT1G14890 5136874 5137982 + Intergenic -1485
NC_003070.9 5135522 5135534 AAAAT 12 + 2 AATAA AT1G14890 5136874 5137982 + Intergenic -1340
NC_003070.9 5135525 5135537 AAAAAT 12 + 2 AAAATA AT1G14890 5136874 5137982 + Intergenic -1337
NC_003070.9 5135846 5135861 AATATT 15 + 2 ATTAAT AT1G14890 5136874 5137982 + Intergenic -1013
NC_003070.9 5137700 5137712 AACT 12 + 3 CTAA AT1G14890 5136874 5137982 + Genic 826
NC_003070.9 5137866 5137881 AATATT 15 + 2 TATTAA AT1G14890 5136874 5137982 + Genic 992
NC_003070.9 5137971 5137992 A 21 - 21 T AT1G14890 5136874 5137982 + Genic 1097
NC_003070.9 5138458 5138472 AAT 14 + 4 TAA HMGA 5138116 5139467 - Exon 995
NC_003070.9 5138924 5138937 AGC 13 + 4 CAG HMGA 5138116 5139467 - Exon 530
NC_003070.9 5139000 5139012 AGATCC 12 - 2 ATCTGG HMGA 5138116 5139467 - Exon 455
NC_003070.9 5140919 5140931 AAACAG 12 + 2 GAAACA AT1G14910 5139712 5143735 - Genic 2804
NC_003070.9 5141409 5141421 ACTCCT 12 - 2 GTAGGA AT1G14910 5139712 5143735 - Genic 2314
NC_003070.9 5143233 5143245 AAATAC 12 + 2 ACAAAT AT1G14910 5139712 5143735 - Genic 490