MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 7426 to 7450 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5229730 5229747 ACCTAT 17 + 2 ATACCT AT1G15200 5228300 5231184 - Genic 1437
NC_003070.9 5229874 5229886 AAGATG 12 + 2 GAAGAT AT1G15200 5228300 5231184 - Genic 1298
NC_003070.9 5231181 5231193 AAAATT 12 - 2 TTTAAT AT1G15200 5228300 5231184 - Genic 3
NC_003070.9 5231314 5231326 AAATCG 12 + 2 GAAATC ABCG35 5231345 5236886 - Intergenic 5560
NC_003070.9 5231479 5231491 AAAAG 12 + 2 AAGAA ABCG35 5231345 5236886 - Exon 5395
NC_003070.9 5233815 5233828 AAAAG 13 + 2 AAAAG ABCG35 5231345 5236886 - Intron 3058
NC_003070.9 5235692 5235705 AAAAAC 13 + 2 AACAAA ABCG35 5231345 5236886 - Intron 1181
NC_003070.9 5236427 5236440 AAGACG 13 - 2 TCTTCG ABCG35 5231345 5236886 - Exon 446
NC_003070.9 5236618 5236630 AAG 12 - 4 CTT ABCG35 5231345 5236886 - Exon 256
NC_003070.9 5237898 5237911 AAAAT 13 + 2 TAAAA SHH1 5238044 5240051 + Intergenic -133
NC_003070.9 5237968 5237980 AAT 12 - 4 TAT SHH1 5238044 5240051 + Intergenic -64
NC_003070.9 5238064 5238080 AAG 16 - 5 CTT SHH1 5238044 5240051 + Exon 20
NC_003070.9 5242768 5242782 AAGATG 14 - 2 TCTTCA AT1G15230 5242073 5243262 - Genic 480
NC_003070.9 5243415 5243427 AAAAAT 12 + 2 AATAAA AT1G15240 5243383 5248693 + Genic 32
NC_003070.9 5248224 5248236 A 12 - 12 T AT1G15240 5243383 5248693 + Genic 4841
NC_003070.9 5249135 5249148 ACAGAG 13 + 2 AGACAG AT1G15250 5248664 5249676 - Genic 528
NC_003070.9 5249996 5250010 AAACCC 14 + 2 CCCAAA AT1G15260 5249760 5250573 + Genic 236
NC_003070.9 5250932 5250944 AAAAC 12 + 2 CAAAA AT1G15270 5250650 5252121 - Genic 1177
NC_003070.9 5252629 5252643 ATC 14 - 4 TGA AT1G15280 5252285 5256863 + Genic 344
NC_003070.9 5253450 5253462 ACATGT 12 + 2 ACATGT AT1G15280 5252285 5256863 + Genic 1165
NC_003070.9 5255408 5255421 AAATAT 13 - 2 TATATT AT1G15280 5252285 5256863 + Genic 3123
NC_003070.9 5256424 5256436 AAGGG 12 + 2 AAGGG AT1G15280 5252285 5256863 + Genic 4139
NC_003070.9 5256653 5256665 AATCT 12 + 2 AATCT AT1G15280 5252285 5256863 + Genic 4368
NC_003070.9 5257058 5257071 AATCTG 13 - 2 TCAGAT AT1G15290 5256870 5265155 - Genic 8084
NC_003070.9 5259852 5259865 AAGTG 13 + 2 AAGTG AT1G15290 5256870 5265155 - Genic 5290