MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 7626 to 7650 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5384557 5384570 AAGAG 13 + 2 AGAGA CENP-C 5381032 5385380 + Exon 3525
NC_003070.9 5387600 5387612 AAATAC 12 - 2 TTGTAT CENP-C 5381032 5385380 + Intergenic 6568
NC_003070.9 5388346 5388360 A 14 + 14 A AT1G15670 5389952 5391672 + Intergenic -1592
NC_003070.9 5389430 5389442 AAAAGT 12 - 2 ACTTTT AT1G15670 5389952 5391672 + Intergenic -510
NC_003070.9 5389688 5389700 AATTCG 12 + 2 TTCGAA AT1G15670 5389952 5391672 + Intergenic -252
NC_003070.9 5390065 5390077 AAAATG 12 - 2 CATTTT AT1G15670 5389952 5391672 + Genic 113
NC_003070.9 5390962 5390974 ATC 12 - 4 TGA AT1G15670 5389952 5391672 + Genic 1010
NC_003070.9 5392110 5392125 AT 15 + 7 TA AT1G15670 5389952 5391672 + Intergenic 2158
NC_003070.9 5392122 5392134 AACCAT 12 - 2 TATGGT AT1G15670 5389952 5391672 + Intergenic 2170
NC_003070.9 5392343 5392359 AATT 16 + 4 AATT AT1G15670 5389952 5391672 + Intergenic 2391
NC_003070.9 5392379 5392392 AAAAAT 13 + 2 AAATAA AT1G15670 5389952 5391672 + Intergenic 2427
NC_003070.9 5392915 5392927 AAGCT 12 + 2 GCTAA AT1G15680 5393407 5394639 + Intergenic -480
NC_003070.9 5394161 5394173 ATC 12 - 4 TGA AT1G15680 5393407 5394639 + Genic 754
NC_003070.9 5394731 5394743 AAAAAC 12 - 2 TTTTTG AT1G15680 5393407 5394639 + Intergenic 1324
NC_003070.9 5395805 5395819 AAAAC 14 + 2 AAAAC AT1G05177 5396178 5396631 - Intergenic 812
NC_003070.9 5396369 5396382 AAAAAC 13 + 2 AACAAA AT1G05177 5396178 5396631 - Genic 249
NC_003070.9 5397258 5397271 ACG 13 + 4 ACG AT1G05177 5396178 5396631 - Intergenic -627
NC_003070.9 5397666 5397679 AAAAT 13 - 2 TATTT AT1G05177 5396178 5396631 - Intergenic -1035
NC_003070.9 5398037 5398055 A 18 - 18 T AVP1 5398926 5402733 + Intergenic -871
NC_003070.9 5398181 5398193 AACAAT 12 - 2 TTGTTA AVP1 5398926 5402733 + Intergenic -733
NC_003070.9 5399303 5399316 AAGAGG 13 + 2 GAGGAA AVP1 5398926 5402733 + Exon 377
NC_003070.9 5400727 5400741 AAACAC 14 - 2 TTTGTG AVP1 5398926 5402733 + Exon 1801
NC_003070.9 5400982 5400995 AATAGC 13 - 2 TTGCTA AVP1 5398926 5402733 + Exon 2056
NC_003070.9 5401034 5401048 AACAGC 14 - 2 TGTTGC AVP1 5398926 5402733 + Exon 2108
NC_003070.9 5401265 5401278 AAGC 13 - 3 GCTT AVP1 5398926 5402733 + Intron 2339