MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 8076 to 8100 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5723316 5723328 AGATGG 12 - 2 TCTCCA HCF173 5722891 5726478 + Exon 425
NC_003070.9 5724651 5724664 AAGCAT 13 - 2 TATGCT HCF173 5722891 5726478 + Intron 1760
NC_003070.9 5727634 5727647 ACCCG 13 + 2 CGACC AT1G16740 5727622 5729115 + Genic 12
NC_003070.9 5731814 5731831 AG 17 + 8 AG AT1G16750 5729057 5731934 - Genic 103
NC_003070.9 5732092 5732104 AATGAT 12 + 2 AATGAT AT1G16750 5729057 5731934 - Intergenic -158
NC_003070.9 5733235 5733250 A 15 + 15 A AT1G05263 5733333 5733554 - Intergenic 304
NC_003070.9 5733382 5733395 ACTC 13 - 3 AGTG AT1G05263 5733333 5733554 - Genic 159
NC_003070.9 5733809 5733821 AAAAAG 12 - 2 TTTTCT AT1G05263 5733333 5733554 - Intergenic -255
NC_003070.9 5734182 5734209 A 27 + 27 A AT1G16760 5734190 5737704 + Genic -8
NC_003070.9 5734211 5734228 AAG 17 + 5 AAG AT1G16760 5734190 5737704 + Genic 21
NC_003070.9 5734298 5734311 AAAGAC 13 + 2 AGACAA AT1G16760 5734190 5737704 + Genic 108
NC_003070.9 5735414 5735426 AATCTG 12 - 2 TTCAGA AT1G16760 5734190 5737704 + Genic 1224
NC_003070.9 5735569 5735581 AGAGC 12 + 2 CAGAG AT1G16760 5734190 5737704 + Genic 1379
NC_003070.9 5738815 5738827 AGG 12 + 4 AGG AT1G16770 5737839 5739377 + Genic 976
NC_003070.9 5738850 5738864 AAAGAG 14 + 2 AGAGAA AT1G16770 5737839 5739377 + Genic 1011
NC_003070.9 5740148 5740164 AAAAAT 16 + 2 AAAAAT VHP2%3B2 5739468 5744636 - Intron 4472
NC_003070.9 5741474 5741487 AAAAT 13 + 2 AAATA VHP2%3B2 5739468 5744636 - Exon 3149
NC_003070.9 5742113 5742125 AAATGC 12 + 2 ATGCAA VHP2%3B2 5739468 5744636 - Intron 2511
NC_003070.9 5743362 5743375 AAATAG 13 + 2 AGAAAT VHP2%3B2 5739468 5744636 - Intron 1261
NC_003070.9 5743980 5743997 AAAACG 17 + 2 AAACGA VHP2%3B2 5739468 5744636 - Intron 639
NC_003070.9 5744463 5744475 AAGCCC 12 + 2 GCCCAA VHP2%3B2 5739468 5744636 - Intron 161
NC_003070.9 5745502 5745515 AAAC 13 - 3 TTGT AT1G16800 5744484 5755468 - Genic 9953
NC_003070.9 5746828 5746841 AAGCTG 13 - 2 CAGCTT AT1G16800 5744484 5755468 - Genic 8627
NC_003070.9 5748086 5748098 AAATTC 12 - 2 TTGAAT AT1G16800 5744484 5755468 - Genic 7370
NC_003070.9 5750875 5750887 AAGCAG 12 + 2 GAAGCA AT1G16800 5744484 5755468 - Genic 4581