MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 8376 to 8400 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5934462 5934478 AAACC 16 - 3 TGGTT AT1G17340 5933780 5938817 + Genic 682
NC_003070.9 5936679 5936691 AAATGC 12 + 2 AATGCA AT1G17340 5933780 5938817 + Genic 2899
NC_003070.9 5938566 5938583 AAAG 17 - 4 TTTC AT1G17340 5933780 5938817 + Genic 4786
NC_003070.9 5938676 5938688 AAAC 12 - 3 GTTT AT1G17340 5933780 5938817 + Genic 4896
NC_003070.9 5939158 5939171 AACAAG 13 + 2 AAGAAC AT1G17340 5933780 5938817 + Intergenic 5378
NC_003070.9 5939285 5939298 AAAACC 13 + 2 ACCAAA AT1G17340 5933780 5938817 + Intergenic 5505
NC_003070.9 5939664 5939677 AT 13 + 6 AT AT1G17345 5940292 5941525 + Intergenic -615
NC_003070.9 5939717 5939730 ACTATC 13 + 2 ATCACT AT1G17345 5940292 5941525 + Intergenic -562
NC_003070.9 5940361 5940373 AAAGAG 12 - 2 TTCTCT AT1G17345 5940292 5941525 + Genic 69
NC_003070.9 5942542 5942556 AAGCAC 14 - 2 TTGTGC AT1G17350 5941549 5944465 + Genic 993
NC_003070.9 5943765 5943777 AAAATC 12 - 2 TTGATT AT1G17350 5941549 5944465 + Genic 2216
NC_003070.9 5944843 5944855 AAGAG 12 - 2 TTCTC AT1G17350 5941549 5944465 + Intergenic 3294
NC_003070.9 5945088 5945101 AAAAG 13 + 2 AAGAA AT1G17350 5941549 5944465 + Intergenic 3539
NC_003070.9 5945281 5945293 AAAATC 12 - 2 TTGATT AT1G17350 5941549 5944465 + Intergenic 3732
NC_003070.9 5945296 5945308 AATC 12 + 3 ATCA AT1G17350 5941549 5944465 + Intergenic 3747
NC_003070.9 5946181 5946193 AAATAT 12 + 2 ATAAAT AT1G17360 5946448 5951561 + Intergenic -255
NC_003070.9 5949413 5949425 AGATGC 12 + 2 ATGCAG AT1G17360 5946448 5951561 + Genic 2965
NC_003070.9 5950165 5950178 AAACAC 13 + 2 CAAACA AT1G17360 5946448 5951561 + Genic 3717
NC_003070.9 5950557 5950569 AAG 12 + 4 GAA AT1G17360 5946448 5951561 + Genic 4109
NC_003070.9 5951426 5951438 AAATGT 12 - 2 TTTACA AT1G17360 5946448 5951561 + Genic 4978
NC_003070.9 5951617 5951638 AAAGAG 21 + 3 AGAGAA UBP1B 5951542 5955143 - Exon 3505
NC_003070.9 5951750 5951762 AAAAG 12 + 2 AAGAA UBP1B 5951542 5955143 - Exon 3381
NC_003070.9 5951753 5951765 AAAAAG 12 + 2 AAAAGA UBP1B 5951542 5955143 - Exon 3378
NC_003070.9 5952191 5952203 AACT 12 - 3 AGTT UBP1B 5951542 5955143 - Intron 2940
NC_003070.9 5953054 5953067 AAATCC 13 + 2 CAAATC UBP1B 5951542 5955143 - Exon 2076