MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 8501 to 8525 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 6028763 6028775 AAAAG 12 - 2 TTTTC TIM23-1 6027487 6029115 + Intron 1276
NC_003070.9 6032049 6032061 AAGATT 12 + 2 AGATTA AT1G17540 6029138 6032860 - Genic 799
NC_003070.9 6032259 6032276 AT 17 + 8 TA AT1G17540 6029138 6032860 - Genic 584
NC_003070.9 6032452 6032473 ATC 21 - 7 ATG AT1G17540 6029138 6032860 - Genic 387
NC_003070.9 6032782 6032794 AAGAG 12 + 2 AGAAG AT1G17540 6029138 6032860 - Genic 66
NC_003070.9 6032790 6032804 AGAGG 14 + 2 AGAGG AT1G17540 6029138 6032860 - Genic 56
NC_003070.9 6033001 6033013 AAAAAT 12 - 2 TTTTTA AT1G17545 6033109 6033908 + Intergenic -96
NC_003070.9 6033205 6033217 AAACTC 12 - 2 GTTTGA AT1G17545 6033109 6033908 + Genic 96
NC_003070.9 6034363 6034377 AAACG 14 - 2 GTTTC HAB2 6034270 6037398 + Exon 93
NC_003070.9 6034500 6034515 AAAAAC 15 - 2 TTTTGT HAB2 6034270 6037398 + Exon 230
NC_003070.9 6037303 6037318 AACAAT 15 - 2 TATTGT HAB2 6034270 6037398 + Exon 3033
NC_003070.9 6039331 6039343 AAAGG 12 - 2 CTTTC MYA1 6039250 6049685 + Exon 81
NC_003070.9 6043056 6043069 AAAAGC 13 - 2 GCTTTT MYA1 6039250 6049685 + Intron 3806
NC_003070.9 6043284 6043296 AAACCT 12 - 2 TTTAGG MYA1 6039250 6049685 + Intron 4034
NC_003070.9 6043660 6043672 AACTTC 12 - 2 TTGAAG MYA1 6039250 6049685 + Intron 4410
NC_003070.9 6044162 6044174 AATATT 12 + 2 TATTAA MYA1 6039250 6049685 + Intron 4912
NC_003070.9 6044643 6044655 ACCATG 12 - 2 GTCATG MYA1 6039250 6049685 + Intron 5393
NC_003070.9 6046216 6046228 AAACAG 12 - 2 TTTCTG MYA1 6039250 6049685 + Intron 6966
NC_003070.9 6047950 6047963 AACCAG 13 - 2 TCTGGT MYA1 6039250 6049685 + Intron 8700
NC_003070.9 6050010 6050022 AATAGT 12 + 2 ATAGTA NF-YA8 6050164 6052628 - Intergenic 2606
NC_003070.9 6050017 6050031 ACT 14 - 4 TAG NF-YA8 6050164 6052628 - Intergenic 2597
NC_003070.9 6050146 6050158 ACTATG 12 + 2 CTATGA NF-YA8 6050164 6052628 - Intergenic 2470
NC_003070.9 6050253 6050268 AAATGT 15 - 2 ATTTAC NF-YA8 6050164 6052628 - Exon 2360
NC_003070.9 6050274 6050286 AATCC 12 + 2 TCCAA NF-YA8 6050164 6052628 - Exon 2342
NC_003070.9 6051799 6051811 ACCAGG 12 - 2 TCCTGG NF-YA8 6050164 6052628 - Exon 817