MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1126 to 1150 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 727110 727124 AAAG 14 + 3 AAAG SPI 712440 727553 - Exon 429
NC_003070.9 727355 727371 AAAAAC 16 - 2 TTTTGT SPI 712440 727553 - Exon 182
NC_003070.9 728238 728250 AATTAT 12 + 2 AATTAT SPI 712440 727553 - Intergenic -685
NC_003070.9 728517 728529 AGAT 12 - 3 TATC SPI 712440 727553 - Intergenic -964
NC_003070.9 731923 731935 AAAAGC 12 - 2 TTTGCT NET1D 731554 738306 - Exon 6371
NC_003070.9 732059 732071 AATGAG 12 - 2 TCTCAT NET1D 731554 738306 - Exon 6235
NC_003070.9 735642 735654 ACTGAG 12 + 2 CTGAGA NET1D 731554 738306 - Exon 2652
NC_003070.9 737149 737161 AAAAGT 12 + 2 TAAAAG NET1D 731554 738306 - Intron 1145
NC_003070.9 737448 737463 AAG 15 + 5 GAA NET1D 731554 738306 - Exon 843
NC_003070.9 737917 737929 AAAGCG 12 - 2 GCTTTC NET1D 731554 738306 - Exon 377
NC_003070.9 737930 737953 AAG 23 - 7 CTT NET1D 731554 738306 - Exon 353
NC_003070.9 738034 738046 AAG 12 + 4 GAA NET1D 731554 738306 - Exon 260
NC_003070.9 738318 738332 AAAAAG 14 - 2 CTTTTT NET1D 731554 738306 - Intergenic -12
NC_003070.9 738424 738439 A 15 + 15 A NET1D 731554 738306 - Intergenic -118
NC_003070.9 738624 738636 AACTCT 12 - 2 GAGTTA NET1D 731554 738306 - Intergenic -318
NC_003070.9 741567 741579 AAAAT 12 - 2 ATTTT MCCA 739544 744184 + Exon 2023
NC_003070.9 743377 743389 AAGATG 12 + 2 TGAAGA MCCA 739544 744184 + Exon 3833
NC_003070.9 748084 748101 A 17 - 17 T AT1G03106 748101 749034 - Genic 933
NC_003070.9 748359 748372 AATGAT 13 + 2 TGATAA AT1G03106 748101 749034 - Genic 662
NC_003070.9 749342 749359 AAC 17 + 5 AAC TRM82 749246 751976 + Exon 96
NC_003070.9 749449 749467 ACAGCG 18 - 3 CTGTCG TRM82 749246 751976 + Exon 203
NC_003070.9 750002 750018 AAAACT 16 - 2 TTTTAG TRM82 749246 751976 + Intron 756
NC_003070.9 751739 751751 AAGAG 12 + 2 GAAGA TRM82 749246 751976 + Exon 2493
NC_003070.9 751967 751979 A 12 + 12 A TRM82 749246 751976 + Exon 2721
NC_003070.9 752254 752267 AAAAC 13 + 2 AAAAC RAB28 752191 753140 + Exon 63