MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1301 to 1325 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 880257 880272 AAAATC 15 + 2 CAAAAT AT1G03520 877861 880259 - Genic 2
NC_003070.9 880548 880560 AATCAT 12 + 2 ATCATA NAF1 880384 883599 - Exon 3039
NC_003070.9 880689 880703 ACCTCT 14 + 2 CCTCTA NAF1 880384 883599 - Exon 2896
NC_003070.9 881165 881177 AATGCC 12 - 2 TGGCAT NAF1 880384 883599 - Exon 2422
NC_003070.9 881209 881225 AAAATC 16 - 2 TTTGAT NAF1 880384 883599 - Exon 2374
NC_003070.9 882205 882217 AATAGT 12 + 2 TAATAG NAF1 880384 883599 - Intron 1382
NC_003070.9 882349 882378 ATC 29 + 9 TCA NAF1 880384 883599 - Exon 1221
NC_003070.9 882373 882388 AGGATG 15 - 2 TCATCC NAF1 880384 883599 - Exon 1211
NC_003070.9 883496 883508 AAAGCC 12 - 2 TTGGCT NAF1 880384 883599 - Exon 91
NC_003070.9 883574 883587 AAAAG 13 - 2 TTTTC NAF1 880384 883599 - Exon 12
NC_003070.9 883608 883622 AAAATT 14 - 2 ATTTTA NAF1 880384 883599 - Intergenic -9
NC_003070.9 887271 887283 AAG 12 + 4 AGA SCAMP4 885623 887956 - Exon 673
NC_003070.9 888630 888642 AAAAT 12 + 2 AATAA AT1G08825 889095 890027 - Intergenic 1385
NC_003070.9 888633 888647 AAAAAT 14 + 2 AAAATA AT1G08825 889095 890027 - Intergenic 1380
NC_003070.9 888791 888807 A 16 + 16 A AT1G08825 889095 890027 - Intergenic 1220
NC_003070.9 888963 888975 AAAT 12 + 3 AAAT AT1G08825 889095 890027 - Intergenic 1052
NC_003070.9 889826 889839 AAAAGC 13 - 2 TTTGCT AT1G08825 889095 890027 - Genic 188
NC_003070.9 889876 889889 AAAAC 13 - 2 TTTGT AT1G08825 889095 890027 - Genic 138
NC_003070.9 890918 890931 AAG 13 - 4 CTT AT1G03560 890155 892492 - Genic 1561
NC_003070.9 893924 893941 AGC 17 - 5 TGC AT1G03590 894238 897718 - Intergenic 3777
NC_003070.9 894348 894361 AG 13 + 6 AG AT1G03590 894238 897718 - Genic 3357
NC_003070.9 896183 896195 ATCCC 12 + 2 CATCC AT1G03590 894238 897718 - Genic 1523
NC_003070.9 897287 897300 AAAGAC 13 + 2 ACAAAG AT1G03590 894238 897718 - Genic 418
NC_003070.9 897448 897460 AG 12 + 6 AG AT1G03590 894238 897718 - Genic 258
NC_003070.9 897512 897528 AAG 16 + 5 AGA AT1G03590 894238 897718 - Genic 190