MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1401 to 1425 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 934744 934756 AAACAG 12 - 2 CTGTTT AT1G03740 933426 937152 + Genic 1318
NC_003070.9 937629 937641 AAACCT 12 + 2 CCTAAA AT1G03746 937401 937485 - Intergenic -144
NC_003070.9 940823 940836 AACATC 13 + 2 CAACAT SWI2 937826 941162 + Exon 2997
NC_003070.9 940872 940884 AAAAAG 12 + 2 AAAGAA SWI2 937826 941162 + Exon 3046
NC_003070.9 942749 942761 AAGAG 12 - 2 TCTCT AT1G03760 941062 943377 - Genic 616
NC_003070.9 944258 944270 AAAATC 12 - 2 ATTTTG RING1B 944572 947682 + Intergenic -302
NC_003070.9 945156 945168 AATCAG 12 + 2 ATCAGA RING1B 944572 947682 + Exon 584
NC_003070.9 946474 946488 ATC 14 - 4 ATG RING1B 944572 947682 + Exon 1902
NC_003070.9 948647 948659 AAAAAC 12 + 2 ACAAAA TPX2 947520 951850 - Intron 3191
NC_003070.9 950011 950023 ACACTG 12 - 2 TGTCAG TPX2 947520 951850 - Exon 1827
NC_003070.9 954467 954479 AGATAT 12 - 2 TCTATA SOM 954290 956144 + Exon 177
NC_003070.9 954536 954548 AAAACC 12 + 2 CAAAAC SOM 954290 956144 + Exon 246
NC_003070.9 955535 955547 AGATGG 12 - 2 TCTCCA SOM 954290 956144 + Exon 1245
NC_003070.9 955985 955997 AAAAAG 12 - 2 TTTTCT SOM 954290 956144 + Exon 1695
NC_003070.9 956185 956198 AAGACG 13 - 2 TTCGTC SOM 954290 956144 + Intergenic 1895
NC_003070.9 957956 957969 ACGGCC 13 + 2 CACGGC ERF10 957104 958383 - Exon 414
NC_003070.9 959230 959242 AAACT 12 - 2 TAGTT AT1G03810 958759 959609 + Genic 471
NC_003070.9 959332 959346 AAACAC 14 - 2 TGTGTT AT1G03810 958759 959609 + Genic 573
NC_003070.9 960247 960259 AAGTGT 12 + 2 AGTGTA AT1G03820 959790 960916 - Genic 657
NC_003070.9 960266 960285 AAC 19 - 6 TTG AT1G03820 959790 960916 - Genic 631
NC_003070.9 960325 960337 AAG 12 - 4 TTC AT1G03820 959790 960916 - Genic 579
NC_003070.9 960515 960531 AGCTCC 16 - 2 GGAGCT AT1G03820 959790 960916 - Genic 385
NC_003070.9 961223 961235 AATAT 12 - 2 TATTA AT1G03820 959790 960916 - Intergenic -307
NC_003070.9 961573 961585 AACGAC 12 - 2 TTGTCG AT1G03830 961684 966790 - Intergenic 5205
NC_003070.9 962263 962275 ACGGGC 12 - 2 CCCGTG AT1G03830 961684 966790 - Genic 4515