MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1551 to 1575 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1042374 1042386 AAAATC 12 - 2 TGATTT AT1G04040 1042362 1043887 - Genic 1501
NC_003070.9 1042378 1042391 AAATC 13 - 2 TTTGA AT1G04040 1042362 1043887 - Genic 1496
NC_003070.9 1044467 1044480 AAAATC 13 + 2 AATCAA AT1G04040 1042362 1043887 - Intergenic -580
NC_003070.9 1044531 1044545 AAAAAC 14 - 2 TTGTTT AT1G04040 1042362 1043887 - Intergenic -644
NC_003070.9 1044728 1044740 AGAT 12 + 3 AGAT AT1G04040 1042362 1043887 - Intergenic -841
NC_003070.9 1044809 1044823 AAAATT 14 - 2 ATTTTA SUVR1 1045598 1049864 - Intergenic 5041
NC_003070.9 1044937 1044949 AAAAGT 12 + 2 GTAAAA SUVR1 1045598 1049864 - Intergenic 4915
NC_003070.9 1047750 1047762 AAATGC 12 + 2 GCAAAT SUVR1 1045598 1049864 - Exon 2102
NC_003070.9 1048393 1048407 AAGATG 14 - 2 TCATCT SUVR1 1045598 1049864 - Exon 1457
NC_003070.9 1048520 1048548 AAGATG 28 + 4 GAAGAT SUVR1 1045598 1049864 - Exon 1316
NC_003070.9 1048588 1048600 AAGATG 12 - 2 TTCATC SUVR1 1045598 1049864 - Exon 1264
NC_003070.9 1048873 1048885 AAG 12 - 4 CTT SUVR1 1045598 1049864 - Exon 979
NC_003070.9 1049470 1049489 A 19 - 19 T SUVR1 1045598 1049864 - Exon 375
NC_003070.9 1053395 1053407 ACTCAT 12 - 2 TGAGTA PRP39 1051312 1056827 + Exon 2083
NC_003070.9 1053872 1053889 AACAGC 17 - 2 TGCTGT PRP39 1051312 1056827 + Exon 2560
NC_003070.9 1054918 1054930 AAAAG 12 - 2 TTTCT PRP39 1051312 1056827 + Intron 3606
NC_003070.9 1055345 1055360 AAAAC 15 - 3 GTTTT PRP39 1051312 1056827 + Intron 4033
NC_003070.9 1055408 1055423 AAAAAC 15 - 2 TTTTGT PRP39 1051312 1056827 + Intron 4096
NC_003070.9 1055640 1055653 AGATGC 13 + 2 CAGATG PRP39 1051312 1056827 + Exon 4328
NC_003070.9 1056056 1056068 AGCAGG 12 - 2 CTGCTC PRP39 1051312 1056827 + Exon 4744
NC_003070.9 1056466 1056478 AGC 12 + 4 GCA PRP39 1051312 1056827 + Exon 5154
NC_003070.9 1056853 1056865 AAAAG 12 + 2 AAAAG PRP39 1051312 1056827 + Intergenic 5541
NC_003070.9 1057727 1057740 AAG 13 + 4 AGA AT1G04090 1057041 1059454 + Genic 686
NC_003070.9 1058924 1058937 AATCCC 13 - 2 TTGGGA AT1G04090 1057041 1059454 + Genic 1883
NC_003070.9 1059639 1059653 A 14 - 14 T IAA10 1059470 1061209 + Exon 169