MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 160126 to 160150 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003076.8 20676633 20676645 AAGT 12 - 3 CTTA TIM8 20675605 20676702 - Exon 57
NC_003076.8 20677101 20677118 A 17 + 17 A TIM8 20675605 20676702 - Intergenic -399
NC_003076.8 20677302 20677315 AATATC 13 + 2 ATATCA TIM8 20675605 20676702 - Intergenic -600
NC_003076.8 20677801 20677813 AAAAG 12 - 2 TTTTC TIM8 20675605 20676702 - Intergenic -1099
NC_003076.8 20678354 20678366 AAAAGG 12 - 2 TTTTCC NAC097 20679222 20680274 + Intergenic -856
NC_003076.8 20680144 20680161 AATGG 17 + 3 TGGAA NAC097 20679222 20680274 + Exon 922
NC_003076.8 20680231 20680248 AT 17 + 8 TA NAC097 20679222 20680274 + Exon 1009
NC_003076.8 20680387 20680399 AAAAAT 12 - 2 TTTTAT NAC097 20679222 20680274 + Intergenic 1165
NC_003076.8 20680402 20680414 AAATAT 12 - 2 ATATTT NAC097 20679222 20680274 + Intergenic 1180
NC_003076.8 20680940 20680953 AATATT 13 + 2 TATTAA NAC097 20679222 20680274 + Intergenic 1718
NC_003076.8 20682255 20682267 AATT 12 + 3 TTAA AT5G50830 20683262 20684890 + Intergenic -995
NC_003076.8 20682543 20682557 AATTAT 14 + 2 TTATAA AT5G50830 20683262 20684890 + Intergenic -705
NC_003076.8 20683297 20683309 AATG 12 - 3 TCAT AT5G50830 20683262 20684890 + Genic 35
NC_003076.8 20683335 20683347 AGAGG 12 - 2 CTCTC AT5G50830 20683262 20684890 + Genic 73
NC_003076.8 20683899 20683911 ATC 12 - 4 ATG AT5G50830 20683262 20684890 + Genic 637
NC_003076.8 20684050 20684065 ATC 15 - 5 TGA AT5G50830 20683262 20684890 + Genic 788
NC_003076.8 20684121 20684136 AAATAC 15 - 2 TATTTG AT5G50830 20683262 20684890 + Genic 859
NC_003076.8 20686157 20686169 AAAAAG 12 + 2 AAAGAA AT5G50840 20685772 20688942 + Genic 385
NC_003076.8 20686725 20686738 AAAG 13 - 3 TTCT AT5G50840 20685772 20688942 + Genic 953
NC_003076.8 20687341 20687353 AAAAAC 12 + 2 ACAAAA AT5G50840 20685772 20688942 + Genic 1569
NC_003076.8 20689080 20689094 AACCG 14 + 2 AACCG AT5G50840 20685772 20688942 + Intergenic 3308
NC_003076.8 20689262 20689274 AATAT 12 + 2 ATAAT MAB1 20689243 20693470 + Exon 19
NC_003076.8 20691833 20691846 ACCCTG 13 + 2 GACCCT MAB1 20689243 20693470 + Exon 2590
NC_003076.8 20692981 20692993 AACATC 12 + 2 TCAACA MAB1 20689243 20693470 + Exon 3738
NC_003076.8 20694206 20694219 ATATGC 13 + 2 TATGCA AT5G50860 20693455 20697233 - Genic 3014