MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1626 to 1650 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1109434 1109446 A 12 - 12 T AT1G04200 1109395 1114155 + Genic 39
NC_003070.9 1114420 1114432 AG 12 - 6 TC AT1G04210 1114375 1119739 + Genic 45
NC_003070.9 1115082 1115094 AAGCTC 12 - 2 GAGCTT AT1G04210 1114375 1119739 + Genic 707
NC_003070.9 1116539 1116551 AAGAGG 12 + 2 GAAGAG AT1G04210 1114375 1119739 + Genic 2164
NC_003070.9 1117034 1117046 AAAACC 12 - 2 GTTTTG AT1G04210 1114375 1119739 + Genic 2659
NC_003070.9 1119074 1119087 ACTCTC 13 + 2 TCTCAC AT1G04210 1114375 1119739 + Genic 4699
NC_003070.9 1119800 1119812 ACATC 12 - 2 GATGT KCS2 1119699 1122786 - Exon 2974
NC_003070.9 1119938 1119953 AAG 15 - 5 TCT KCS2 1119699 1122786 - Exon 2833
NC_003070.9 1120689 1120703 A 14 + 14 A KCS2 1119699 1122786 - Intron 2083
NC_003070.9 1120767 1120779 ATATGC 12 + 2 GCATAT KCS2 1119699 1122786 - Intron 2007
NC_003070.9 1120906 1120918 AAAAAT 12 + 2 AAATAA KCS2 1119699 1122786 - Intron 1868
NC_003070.9 1120989 1121005 A 16 + 16 A KCS2 1119699 1122786 - Intron 1781
NC_003070.9 1122296 1122308 AGG 12 + 4 AGG KCS2 1119699 1122786 - Exon 478
NC_003070.9 1122526 1122540 A 14 + 14 A KCS2 1119699 1122786 - Exon 246
NC_003070.9 1123041 1123055 ACCAT 14 + 2 ATACC KCS2 1119699 1122786 - Intergenic -255
NC_003070.9 1123395 1123407 AAAATG 12 - 2 TTTTCA KCS2 1119699 1122786 - Intergenic -609
NC_003070.9 1124411 1124426 AT 15 + 7 AT AT1G04230 1125515 1128788 + Intergenic -1089
NC_003070.9 1124798 1124810 AATT 12 + 3 AATT AT1G04230 1125515 1128788 + Intergenic -705
NC_003070.9 1126378 1126390 AAATCC 12 + 2 AATCCA AT1G04230 1125515 1128788 + Genic 863
NC_003070.9 1127413 1127426 AAAAG 13 - 2 TTTCT AT1G04230 1125515 1128788 + Genic 1898
NC_003070.9 1127655 1127667 AAG 12 + 4 AAG AT1G04230 1125515 1128788 + Genic 2140
NC_003070.9 1129649 1129661 AAAG 12 - 3 TCTT SHY2 1128149 1129689 - Exon 28
NC_003070.9 1130104 1130121 AC 17 + 8 CA SHY2 1128149 1129689 - Intergenic -415
NC_003070.9 1130515 1130531 A 16 - 16 T SHY2 1128149 1129689 - Intergenic -826
NC_003070.9 1130742 1130754 AATTC 12 - 2 TTGAA SHY2 1128149 1129689 - Intergenic -1053