MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 2251 to 2275 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1544792 1544806 ACTGAT 14 - 2 TATCAG ZIP5 1544927 1547849 - Intergenic 3043
NC_003070.9 1546202 1546217 AAGACC 15 + 2 ACCAAG ZIP5 1544927 1547849 - Exon 1632
NC_003070.9 1546396 1546408 AATCCT 12 - 2 AGGATT ZIP5 1544927 1547849 - Intron 1441
NC_003070.9 1546548 1546560 AAAGTG 12 - 2 TCACTT ZIP5 1544927 1547849 - Intron 1289
NC_003070.9 1546563 1546576 AAGTAT 13 - 2 ACTTAT ZIP5 1544927 1547849 - Intron 1273
NC_003070.9 1546920 1546934 AAAAAC 14 + 2 AAAAAC ZIP5 1544927 1547849 - Intron 915
NC_003070.9 1547055 1547067 AATT 12 + 3 TAAT ZIP5 1544927 1547849 - Intron 782
NC_003070.9 1547191 1547212 ACCGCC 21 + 3 CCACCG ZIP5 1544927 1547849 - Exon 637
NC_003070.9 1547661 1547678 AAG 17 + 5 GAA ZIP5 1544927 1547849 - Exon 171
NC_003070.9 1547723 1547736 AAATTC 13 - 2 TTTGAA ZIP5 1544927 1547849 - Exon 113
NC_003070.9 1547745 1547758 AATGAT 13 + 2 ATGATA ZIP5 1544927 1547849 - Exon 91
NC_003070.9 1549387 1549400 AAATC 13 - 2 TGATT AT1G05310 1550503 1552587 - Intergenic 3187
NC_003070.9 1549604 1549617 AAT 13 - 4 TTA AT1G05310 1550503 1552587 - Intergenic 2970
NC_003070.9 1550775 1550787 AAAAAC 12 + 2 AAACAA AT1G05310 1550503 1552587 - Genic 1800
NC_003070.9 1552264 1552287 ATC 23 - 7 TGA AT1G05310 1550503 1552587 - Genic 300
NC_003070.9 1552282 1552298 ACCATC 16 - 2 TGATGG AT1G05310 1550503 1552587 - Genic 289
NC_003070.9 1552404 1552418 ATATCC 14 - 2 TATGGA AT1G05310 1550503 1552587 - Genic 169
NC_003070.9 1553128 1553140 AT 12 + 6 TA AT1G05320 1553568 1557848 + Intergenic -428
NC_003070.9 1554058 1554071 AAATC 13 - 2 TTTGA AT1G05320 1553568 1557848 + Genic 490
NC_003070.9 1554150 1554165 AAAAAT 15 - 2 TTTATT AT1G05320 1553568 1557848 + Genic 582
NC_003070.9 1554589 1554601 AAGAT 12 - 2 TTATC AT1G05320 1553568 1557848 + Genic 1021
NC_003070.9 1555090 1555109 ATC 19 - 6 ATG AT1G05320 1553568 1557848 + Genic 1522
NC_003070.9 1556140 1556153 AAGATC 13 + 2 TCAAGA AT1G05320 1553568 1557848 + Genic 2572
NC_003070.9 1556562 1556574 AAAGAG 12 + 2 GAAAGA AT1G05320 1553568 1557848 + Genic 2994
NC_003070.9 1556981 1556994 AAACAT 13 + 2 AACATA AT1G05320 1553568 1557848 + Genic 3413