MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 2351 to 2375 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1604645 1604657 ACACTC 12 + 2 CACTCA SDE3 1601148 1605034 - Exon 377
NC_003070.9 1604661 1604673 ATC 12 - 4 TGA SDE3 1601148 1605034 - Exon 361
NC_003070.9 1605028 1605040 AAAATT 12 + 2 AAAATT SDE3 1601148 1605034 - Exon 6
NC_003070.9 1605195 1605207 AATTAT 12 + 2 ATAATT SDE3 1601148 1605034 - Intergenic -161
NC_003070.9 1605401 1605413 AAAAAT 12 - 2 TATTTT SDE3 1601148 1605034 - Intergenic -367
NC_003070.9 1606005 1606018 AAAAG 13 - 2 TTTCT SDE3 1601148 1605034 - Intergenic -971
NC_003070.9 1606091 1606103 AAAAGT 12 - 2 TTTTAC SDE3 1601148 1605034 - Intergenic -1057
NC_003070.9 1606915 1606927 ACAGAG 12 - 2 GTCTCT CVP2 1607202 1611840 - Intergenic 4913
NC_003070.9 1608068 1608081 AAAC 13 + 3 ACAA CVP2 1607202 1611840 - Exon 3759
NC_003070.9 1608192 1608204 AAAATC 12 + 2 AAATCA CVP2 1607202 1611840 - Exon 3636
NC_003070.9 1610644 1610657 ACACAT 13 - 2 TATGTG CVP2 1607202 1611840 - Intron 1183
NC_003070.9 1611011 1611023 AACAAG 12 + 2 AACAAG CVP2 1607202 1611840 - Intron 817
NC_003070.9 1611040 1611057 AAAG 17 + 4 AAAG CVP2 1607202 1611840 - Intron 783
NC_003070.9 1611054 1611067 AG 13 + 6 AG CVP2 1607202 1611840 - Intron 773
NC_003070.9 1611325 1611339 AAAAAG 14 - 2 TTTTCT CVP2 1607202 1611840 - Exon 501
NC_003070.9 1611520 1611532 AAAG 12 - 3 CTTT CVP2 1607202 1611840 - Exon 308
NC_003070.9 1611682 1611696 AAAGTT 14 + 2 AAAGTT CVP2 1607202 1611840 - Exon 144
NC_003070.9 1611710 1611728 AAAG 18 + 4 AGAA CVP2 1607202 1611840 - Exon 112
NC_003070.9 1611836 1611848 AAAAAT 12 - 2 TTTTTA CVP2 1607202 1611840 - Exon 4
NC_003070.9 1611869 1611882 AAAC 13 - 3 TTTG CVP2 1607202 1611840 - Intergenic -29
NC_003070.9 1612020 1612035 A 15 - 15 T CVP2 1607202 1611840 - Intergenic -180
NC_003070.9 1612386 1612399 AAAAGT 13 + 2 TAAAAG CVP2 1607202 1611840 - Intergenic -546
NC_003070.9 1612908 1612920 AAATAG 12 - 2 ATTTCT CVP2 1607202 1611840 - Intergenic -1068
NC_003070.9 1613107 1613120 AAAGAG 13 + 2 AAAGAG CVP2 1607202 1611840 - Intergenic -1267
NC_003070.9 1613168 1613181 A 13 - 13 T CVP2 1607202 1611840 - Intergenic -1328