Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 901 to 925 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1753306
1753318
ATCGCC
12
-
2
GATGGC
dsbE
1752923
1753480
+
Genic
383
NZ_CP028592.1
1753370
1753382
AACGGC
12
+
2
ACGGCA
dsbE
1752923
1753480
+
Genic
447
NZ_CP028592.1
1753495
1753509
AGCATC
14
-
2
TGCTGA
C9E72_RS08710
1753477
1754529
+
Genic
18
NZ_CP028592.1
1753808
1753820
AATACC
12
-
2
TATTGG
C9E72_RS08710
1753477
1754529
+
Genic
331
NZ_CP028592.1
1756497
1756509
AGATC
12
+
2
GATCA
C9E72_RS08720
1755531
1758122
+
Genic
966
NZ_CP028592.1
1759790
1759803
AGATGG
13
+
2
AGATGG
pbgA
1758374
1760134
-
Genic
331
NZ_CP028592.1
1760966
1760978
AACCC
12
+
2
CAACC
yejK
1760563
1761570
+
Genic
403
NZ_CP028592.1
1762586
1762600
AAACGG
14
+
2
AAACGG
C9E72_RS08750
1762118
1763878
-
Genic
1278
NZ_CP028592.1
1763712
1763725
ACCAGC
13
+
2
CCAGCA
C9E72_RS08750
1762118
1763878
-
Genic
153
NZ_CP028592.1
1768089
1768101
AGCGCC
12
+
2
CCAGCG
yejF
1766621
1768210
-
Genic
109
NZ_CP028592.1
1771142
1771154
AAAGTC
12
+
2
TCAAAG
C9E72_RS08785
1770332
1772146
-
Genic
992
NZ_CP028592.1
1772084
1772098
AGGCGC
14
-
2
GCCTGC
C9E72_RS08785
1770332
1772146
-
Genic
48
NZ_CP028592.1
1780257
1780269
AAGGGC
12
+
2
GGGCAA
setB
1779467
1780648
-
Genic
379
NZ_CP028592.1
1780662
1780674
AAGAGG
12
+
2
GGAAGA
setB
1779467
1780648
-
Intergenic
-14
NZ_CP028592.1
1783851
1783863
AAAAGC
12
-
2
CTTTTG
fruA
1783101
1784792
+
Genic
750
NZ_CP028592.1
1786911
1786926
AAGCTG
15
+
2
AGCTGA
C9E72_RS08850
1786145
1787083
+
Genic
766
NZ_CP028592.1
1789372
1789384
AATAGC
12
-
2
TGCTAT
rihB
1789326
1790267
+
Genic
46
NZ_CP028592.1
1790399
1790411
AAGCAG
12
-
2
TTCTGC
C9E72_RS08870
1790355
1791568
-
Genic
1157
NZ_CP028592.1
1793677
1793689
CCGCG
12
-
2
CGGCG
C9E72_RS08880
1792986
1794074
-
Genic
385
NZ_CP028592.1
1795145
1795157
ATCGCC
12
+
2
CGCCAT
C9E72_RS08890
1795008
1796057
-
Genic
900
NZ_CP028592.1
1799499
1799511
AACGGT
12
-
2
TACCGT
cirA
1799003
1800982
+
Genic
496
NZ_CP028592.1
1799531
1799543
ATCGCG
12
+
2
ATCGCG
cirA
1799003
1800982
+
Genic
528
NZ_CP028592.1
1800457
1800469
AGCATC
12
+
2
ATCAGC
cirA
1799003
1800982
+
Genic
1454
NZ_CP028592.1
1800731
1800743
AGCGCC
12
-
2
CGCTGG
cirA
1799003
1800982
+
Genic
1728
NZ_CP028592.1
1802297
1802310
ATCGC
13
+
2
CGCAT
folE
1802108
1802776
+
Genic
189