Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 951 to 975 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1863740
1863754
AAATAT
14
-
2
ATATTT
C9E72_RS09350
1863644
1865668
+
Genic
96
NZ_CP028592.1
1865854
1865866
ACGGCC
12
-
2
GTGGCC
C9E72_RS09355
1865756
1866082
+
Genic
98
NZ_CP028592.1
1866885
1866897
AACGTG
12
+
2
TGAACG
C9E72_RS09365
1866359
1866982
+
Genic
526
NZ_CP028592.1
1867107
1867120
AACAGC
13
-
2
TGCTGT
C9E72_RS09370
1866995
1867393
+
Genic
112
NZ_CP028592.1
1867610
1867622
AGGGGC
12
+
2
GGGCAG
C9E72_RS09375
1867401
1868153
+
Genic
209
NZ_CP028592.1
1868361
1868374
AATGGG
13
-
2
CATTCC
C9E72_RS09380
1868167
1868589
+
Genic
194
NZ_CP028592.1
1869095
1869107
ACTG
12
-
3
AGTC
C9E72_RS09385
1868616
1868924
+
Intergenic
479
NZ_CP028592.1
1870029
1870041
ATGCCC
12
-
2
GCATGG
C9E72_RS09385
1868616
1868924
+
Intergenic
1413
NZ_CP028592.1
1872402
1872414
ACGGAG
12
+
2
GACGGA
C9E72_RS09400
1871939
1872637
+
Genic
463
NZ_CP028592.1
1872910
1872922
AGGGC
12
-
2
TGCCC
C9E72_RS09405
1872648
1873391
+
Genic
262
NZ_CP028592.1
1873569
1873581
CCCCGG
12
-
2
GGCCGG
C9E72_RS09410
1873337
1873966
+
Genic
232
NZ_CP028592.1
1874362
1874374
ACACGG
12
+
2
ACGGAC
C9E72_RS09415
1874207
1877686
+
Genic
155
NZ_CP028592.1
1874418
1874431
AGCAGG
13
+
2
GGAGCA
C9E72_RS09415
1874207
1877686
+
Genic
211
NZ_CP028592.1
1877566
1877578
ACACTG
12
+
2
CTGACA
C9E72_RS09415
1874207
1877686
+
Genic
3359
NZ_CP028592.1
1877669
1877682
ACTGAT
13
-
2
GTATCA
C9E72_RS09415
1874207
1877686
+
Genic
3462
NZ_CP028592.1
1878940
1878954
ACGAGG
14
-
2
CGTCCT
C9E72_RS09425
1878418
1879587
+
Genic
522
NZ_CP028592.1
1888262
1888274
ACGGCG
12
+
2
CGGCGA
C9E72_RS09485
1887629
1888765
-
Genic
491
NZ_CP028592.1
1889058
1889070
AGCGCC
12
+
2
GCCAGC
C9E72_RS09490
1888758
1889489
-
Genic
419
NZ_CP028592.1
1889367
1889379
ACAGCC
12
+
2
CACAGC
C9E72_RS09490
1888758
1889489
-
Genic
110
NZ_CP028592.1
1891426
1891438
AGCTCC
12
+
2
AGCTCC
C9E72_RS09500
1891048
1892136
-
Genic
698
NZ_CP028592.1
1892523
1892535
AAGGGT
12
+
2
GTAAGG
C9E72_RS09500
1891048
1892136
-
Intergenic
-387
NZ_CP028592.1
1893132
1893144
AAGGGT
12
+
2
GTAAGG
C9E72_RS09505
1893377
1893694
-
Intergenic
550
NZ_CP028592.1
1898891
1898904
AAAAAT
13
-
2
TTATTT
C9E72_RS09520
1899099
1900379
-
Intergenic
1475
NZ_CP028592.1
1902684
1902697
AAAAAG
13
-
2
TTTTTC
metG
1904342
1906375
-
Intergenic
3678
NZ_CP028592.1
1908416
1908428
AAAAC
12
+
2
AACAA
C9E72_RS09545
1908451
1908993
+
Intergenic
-23